RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 FAM168BA1KXE4 195 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 TSC22D2O75157 780 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 CCL18P55774 89 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 ASAH1Q13510 395 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 C9orf129Q5T035 196 aaKnown RBP0.88□□□□□ -2.27
KNL1-211ENST00000533001 TTC23Q5W5X9 447 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 LGI3Q8N145 548 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 OR5H2Q8NGV7 314 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 MRPL48Q96GC5 212 aaKnown RBP0.88□□□□□ -2.27
KNL1-211ENST00000533001 GPER1Q99527 375 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 C9orf16Q9BUW7 83 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 FUNDC2Q9BWH2 189 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 ZNF355PQ9NSJ1 428 aa0.88□□□□□ -2.27
KNL1-211ENST00000533001 CAV2P51636 162 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 CMC4P56277 68 aaPredicted RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 GABARAPL2P60520 117 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 DHRS2Q13268 280 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 LAMTOR1Q6IAA8 161 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 CPLX4Q7Z7G2 160 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 RPUSD4Q96CM3 377 aaKnown RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 ERGIC3Q9Y282 383 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 LENEPQ9Y5L5 61 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 LY96Q9Y6Y9 160 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 IGHV3OR16-9A0A0B4J2B5 98 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 RPS10-NUDT3A0A1W2PQS6 291 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 CORTO00230 105 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 NUDT3O95989 172 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 IGLC6P0CF74 106 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 MEOX2P50222 304 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 RPL37AP61513 92 aaKnown RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 RBX1P62877 108 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 PPP1R1AQ13522 171 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 ARL6IP6Q8N6S5 226 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 CYB561D1Q8N8Q1 229 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 CCDC197Q8NCU1 140 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 LINC00477Q96M19 166 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 URM1Q9BTM9 101 aaKnown RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 THYN1Q9P016 225 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 RSL24D1Q9UHA3 163 aaKnown RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 U3KQ87 197 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 TRAV4A0A0B4J268 109 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 TRAV12-3A0A0B4J271 114 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 TEX48A0A1B0GUV7 120 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 AGPAT2O15120 278 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 ZNF182P17025 639 aaPredicted RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 Q6ZRP5 223 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 OR5C1Q8NGR4 320 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 SETD6Q8TBK2 473 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 MND1Q9BWT6 205 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 SRRQ9GZT4 340 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 FAM107BQ9H098 131 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 MED28Q9H204 178 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 ARV1Q9H2C2 271 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 PTGES3LE9PB15 166 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 M0QY20 66 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 ERVFC1-1P60608 527 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 PDE6HQ13956 83 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 DTD1Q8TEA8 209 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 PRELID3BQ9Y3B1 194 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 H0Y9J4 135 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 WRBO00258 174 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 RGS13O14921 159 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 HPGDSO60760 199 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 PLA2G1BP04054 148 aaKnown RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 GYPEP15421 78 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 MAPK3P27361 379 aaPredicted RBP0.87□□□□□ -2.27
KNL1-211ENST00000533001 INPP1P49441 399 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 POLR2GP62487 172 aaKnown RBP eCLIP0.87□□□□□ -2.27
KNL1-211ENST00000533001 TATDN3Q17R31 274 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 ZNF674Q2M3X9 581 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 MITD1Q8WV92 249 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 CHCHD7Q9BUK0 85 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 GTSF1LQ9H1H1 148 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 ABRACLQ9P1F3 81 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 RABAC1Q9UI14 185 aa0.87□□□□□ -2.27
KNL1-211ENST00000533001 C7orf71A4D174 169 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 PPP3R1P63098 170 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 COX6A2Q02221 97 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 RCN1Q15293 331 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 TMPRSS11AQ6ZMR5 421 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 SLC38A6Q8IZM9 456 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 STX19Q8N4C7 294 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 RNF185Q96GF1 192 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 RABL2BQ9UNT1 228 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 RBAKDNA6NC62 111 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 C19orf71A6NCJ1 209 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 ZFP92A6NM28 416 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 H3BP45 60 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 ARL6IP5O75915 188 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 INSP01308 110 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 SLC25A5P05141 298 aaKnown RBP0.86□□□□□ -2.27
KNL1-211ENST00000533001 ATP5IP56385 69 aaPredicted RBP0.86□□□□□ -2.27
KNL1-211ENST00000533001 SRSF3P84103 164 aaKnown RBP0.86□□□□□ -2.27
KNL1-211ENST00000533001 MED22Q15528 200 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 KRTAP20-1Q3LI63 56 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 TMEM229BQ8NBD8 167 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 GINS3Q9BRX5 216 aa0.86□□□□□ -2.27
KNL1-211ENST00000533001 RNASE7Q9H1E1 156 aaKnown RBP0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms