RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 PDE6HQ13956 83 aa11.52□□□□□ -0.57
SSH3-210ENST00000532881 CCDC144NLQ6NUI1 221 aa11.52□□□□□ -0.57
SSH3-210ENST00000532881 SCRT2Q9NQ03 307 aa11.52□□□□□ -0.57
SSH3-210ENST00000532881 J3KRW8 73 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 PTTG1IPP53801 180 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 DEFB1P60022 68 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 PRSS57Q6UWY2 283 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 CCDC140Q96MF4 163 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 C18orf15Q96N68 181 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 COL25A1Q9BXS0 654 aaPredicted RBP11.51□□□□□ -0.57
SSH3-210ENST00000532881 ABCA2Q9BZC7 2435 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 C20orf202A1L168 122 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 PSG9Q00887 426 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 SLC25A34Q6PIV7 304 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 COX11Q9Y6N1 276 aa11.51□□□□□ -0.57
SSH3-210ENST00000532881 CBY3A6NI87 242 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 ANKRD39Q53RE8 183 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 BRD3OSQ6XYD6 125 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 HSPB8Q9UJY1 196 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 FLNCQ14315 2725 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 CLPSL1A2RUU4 121 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 HSBP1L1C9JCN9 74 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 CKS2P33552 79 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 LINC01545Q5VT33 79 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 PET117Q6UWS5 81 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 OR10AG1Q8NH19 301 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 ZNF502Q8TBZ5 544 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 ST20Q9HBF5 79 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 C11orf21Q9P2W6 132 aa11.5□□□□□ -0.57
SSH3-210ENST00000532881 CFAP46Q8IYW2 2715 aa11.49□□□□□ -0.57
SSH3-210ENST00000532881 CACNG7P62955 275 aa11.49□□□□□ -0.57
SSH3-210ENST00000532881 EBI3Q14213 229 aa11.49□□□□□ -0.57
SSH3-210ENST00000532881 ZNF493Q6ZR52 646 aa11.49□□□□□ -0.57
SSH3-210ENST00000532881 BUB3O43684 328 aa11.49□□□□□ -0.57
SSH3-210ENST00000532881 DTX2Q86UW9 622 aa11.49□□□□□ -0.57
SSH3-210ENST00000532881 ORMDL3Q8N138 153 aa11.49□□□□□ -0.57
SSH3-210ENST00000532881 IGHV2-70DA0A0C4DH43 119 aa11.48□□□□□ -0.57
SSH3-210ENST00000532881 BVES-AS1Q5T3Y7 98 aa11.48□□□□□ -0.57
SSH3-210ENST00000532881 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.48□□□□□ -0.57
SSH3-210ENST00000532881 ZNF48Q96MX3 618 aaPredicted RBP11.48□□□□□ -0.57
SSH3-210ENST00000532881 IGF1P05019 195 aa11.48□□□□□ -0.57
SSH3-210ENST00000532881 LMO4P61968 165 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 SAPCD1Q5SSQ6 148 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 ZNF738Q8NE65 137 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 TRAV26-2A0A0B4J265 109 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 MINOS1Q5TGZ0 78 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 LCNL1Q6ZST4 164 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 GATD1Q8NB37 220 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 SPOCK3Q9BQ16 436 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 MINOS1-NBL1R4GNA1 71 aa11.47□□□□□ -0.57
SSH3-210ENST00000532881 TRBV12-3P01733 135 aa11.46□□□□□ -0.57
SSH3-210ENST00000532881 TRGV3P03979 118 aa11.46□□□□□ -0.57
SSH3-210ENST00000532881 IGLC6P0CF74 106 aa11.46□□□□□ -0.57
SSH3-210ENST00000532881 NHLH1Q02575 133 aa11.46□□□□□ -0.57
SSH3-210ENST00000532881 C2orf91Q6ZV80 131 aa11.46□□□□□ -0.57
SSH3-210ENST00000532881 RNF185Q96GF1 192 aa11.46□□□□□ -0.57
SSH3-210ENST00000532881 DKK2Q9UBU2 259 aa11.46□□□□□ -0.57
SSH3-210ENST00000532881 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.46□□□□□ -0.581e-6■■■■□ 21.1
SSH3-210ENST00000532881 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.58
SSH3-210ENST00000532881 IGKV3D-20A0A0C4DH25 116 aa11.46□□□□□ -0.58
SSH3-210ENST00000532881 TAX1BP3O14907 124 aa11.46□□□□□ -0.58
SSH3-210ENST00000532881 UBE2E1P51965 193 aa11.46□□□□□ -0.58
SSH3-210ENST00000532881 C1orf122Q6ZSJ8 110 aa11.46□□□□□ -0.58
SSH3-210ENST00000532881 FAM110DQ8TAY7 271 aaPredicted RBP11.46□□□□□ -0.58
SSH3-210ENST00000532881 RNASE8Q8TDE3 154 aaKnown RBP11.46□□□□□ -0.58
SSH3-210ENST00000532881 ORAOV1Q8WV07 137 aa11.46□□□□□ -0.58
SSH3-210ENST00000532881 PSMG3-AS1Q96PY0 264 aa11.46□□□□□ -0.58
SSH3-210ENST00000532881 CENPVL3A0A0U1RRI6 287 aa11.45□□□□□ -0.58
SSH3-210ENST00000532881 VAMP3Q15836 100 aa11.45□□□□□ -0.58
SSH3-210ENST00000532881 Q6AWC8 147 aa11.45□□□□□ -0.58
SSH3-210ENST00000532881 NAA38Q9BRA0 125 aaKnown RBP11.45□□□□□ -0.58
SSH3-210ENST00000532881 TTTY13Q9BZ97 58 aa11.45□□□□□ -0.58
SSH3-210ENST00000532881 U3KQK5 164 aa11.45□□□□□ -0.58
SSH3-210ENST00000532881 TRAV8-2A0A0B4J237 113 aa11.45□□□□□ -0.58
SSH3-210ENST00000532881 ZANQ9Y493 2812 aa11.44□□□□□ -0.58
SSH3-210ENST00000532881 PAX8Q06710 450 aa11.44□□□□□ -0.58
SSH3-210ENST00000532881 LY6EQ16553 131 aa11.44□□□□□ -0.58
SSH3-210ENST00000532881 CENPEQ02224 2701 aa11.44□□□□□ -0.58
SSH3-210ENST00000532881 FABP5P3A8MUU1 101 aa11.44□□□□□ -0.58
SSH3-210ENST00000532881 NPFFO15130 113 aa11.44□□□□□ -0.58
SSH3-210ENST00000532881 UBE2V1Q13404 147 aa11.44□□□□□ -0.58
SSH3-210ENST00000532881 A0A1B0GW15 77 aa11.43□□□□□ -0.58
SSH3-210ENST00000532881 S100A7AQ86SG5 101 aa11.43□□□□□ -0.58
SSH3-210ENST00000532881 GNLYP22749 145 aa11.43□□□□□ -0.58
SSH3-210ENST00000532881 BMI1P35226 326 aa11.43□□□□□ -0.58
SSH3-210ENST00000532881 EFNA4P52798 201 aa11.43□□□□□ -0.58
SSH3-210ENST00000532881 C21orf62-AS1Q17RA5 79 aa11.43□□□□□ -0.58
SSH3-210ENST00000532881 UNQ9165/PRO28630Q6UXU0 137 aa11.43□□□□□ -0.58
SSH3-210ENST00000532881 PCP2Q8IVA1 136 aa11.43□□□□□ -0.58
SSH3-210ENST00000532881 CSPG4Q6UVK1 2322 aa11.43□□□□□ -0.58
SSH3-210ENST00000532881 OOSP1A8MZH6 123 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 GOSR1O95249 250 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 IGHV3-11P01762 117 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 PRR9Q5T870 116 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 Q6ZS46 218 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 C8orf86Q6ZUL3 223 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 HBDP02042 147 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms