RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 KCNRGQ8N5I3 272 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 OR11H4Q8NGC9 324 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 ST6GAL2Q96JF0 529 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 LINC01587Q99440 93 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 ARPC5LQ9BPX5 153 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 PRELID1Q9Y255 219 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 DNAH17Q9UFH2 4485 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 TEX48A0A1B0GUV7 120 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 J3KRW8 73 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 P0DMU3 169 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 FAM231AP0DMU4 169 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 FAM231CP0DMU5 169 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 TSPOP30536 169 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 CDKN1BP46527 198 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 FAM122CQ6P4D5 195 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 TCTE3Q8IZS6 198 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 FXYD5Q96DB9 178 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 MRPL53Q96EL3 112 aaKnown RBP12.53□□□□□ -0.4
SMG1-203ENST00000532700 PPP1R14DQ9NXH3 145 aa12.53□□□□□ -0.4
SMG1-203ENST00000532700 IGLV2-18A0A075B6J9 118 aa12.52□□□□□ -0.41
SMG1-203ENST00000532700 RTL8CO15255 209 aa12.52□□□□□ -0.41
SMG1-203ENST00000532700 OR10J4P0C629 311 aa12.52□□□□□ -0.41
SMG1-203ENST00000532700 UBE2L3P68036 154 aaKnown RBP12.52□□□□□ -0.41
SMG1-203ENST00000532700 ERCC8Q13216 396 aa12.52□□□□□ -0.41
SMG1-203ENST00000532700 PQLC2Q6ZP29 291 aa12.52□□□□□ -0.41
SMG1-203ENST00000532700 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.41
SMG1-203ENST00000532700 RNASE8Q8TDE3 154 aaKnown RBP12.52□□□□□ -0.41
SMG1-203ENST00000532700 SH3BGRL3Q9H299 93 aa12.52□□□□□ -0.41
SMG1-203ENST00000532700 hCG_2014768A0A024R1R8 64 aa12.51□□□□□ -0.41
SMG1-203ENST00000532700 A0A1B0GVY2 172 aa12.51□□□□□ -0.41
SMG1-203ENST00000532700 KANTRA0A1W2PQU2 76 aa12.51□□□□□ -0.41
SMG1-203ENST00000532700 LYRM9A8MSI8 78 aa12.51□□□□□ -0.41
SMG1-203ENST00000532700 NPIPB6E9PJ23 425 aa12.51□□□□□ -0.41
SMG1-203ENST00000532700 CDC34P49427 236 aaPredicted RBP12.51□□□□□ -0.41
SMG1-203ENST00000532700 TAS2R60P59551 318 aa12.51□□□□□ -0.41
SMG1-203ENST00000532700 EXOC3-AS1Q8N2X6 119 aa12.51□□□□□ -0.41
SMG1-203ENST00000532700 ACTR3CQ9C0K3 210 aaPredicted RBP12.51□□□□□ -0.41
SMG1-203ENST00000532700 CYTL1Q9NRR1 136 aa12.51□□□□□ -0.41
SMG1-203ENST00000532700 Q6ZQT7 251 aa12.5□□□□□ -0.41
SMG1-203ENST00000532700 AKAP14Q86UN6 197 aa12.5□□□□□ -0.41
SMG1-203ENST00000532700 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
SMG1-203ENST00000532700 ZNF503Q96F45 646 aa12.5□□□□□ -0.41
SMG1-203ENST00000532700 BCL2L11O43521 198 aa12.49□□□□□ -0.41
SMG1-203ENST00000532700 EIF3GO75821 320 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMG1-203ENST00000532700 EIF5AP63241 154 aaKnown RBP12.49□□□□□ -0.41
SMG1-203ENST00000532700 ICAM4Q14773 271 aa12.49□□□□□ -0.41
SMG1-203ENST00000532700 AKR1C8PQ5T2L2 129 aa12.49□□□□□ -0.41
SMG1-203ENST00000532700 Q6ZR54 194 aa12.49□□□□□ -0.41
SMG1-203ENST00000532700 TMEM256Q8N2U0 113 aa12.49□□□□□ -0.41
SMG1-203ENST00000532700 RAB24Q969Q5 203 aa12.49□□□□□ -0.41
SMG1-203ENST00000532700 FAM210BQ96KR6 192 aa12.49□□□□□ -0.41
SMG1-203ENST00000532700 NOP10Q9NPE3 64 aaKnown RBP12.49□□□□□ -0.41
SMG1-203ENST00000532700 HERC2O95714 4834 aa12.49□□□□□ -0.41
SMG1-203ENST00000532700 TRAV12-3A0A0B4J271 114 aa12.48□□□□□ -0.41
SMG1-203ENST00000532700 PFDN1O60925 122 aa12.48□□□□□ -0.41
SMG1-203ENST00000532700 RANP62826 216 aaKnown RBP12.48□□□□□ -0.41
SMG1-203ENST00000532700 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
SMG1-203ENST00000532700 F5H768 121 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 HMGB3O15347 200 aaKnown RBP12.47□□□□□ -0.41
SMG1-203ENST00000532700 C1QBP02746 253 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 STAG3L2P0CL84 134 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 STAG3L3P0CL85 134 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 CSN1S1P47710 185 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 PRR9Q5T870 116 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 TMUB2Q71RG4 321 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 UBE2DNLQ8IWF7 75 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 TMEM263Q8WUH6 116 aaKnown RBP12.47□□□□□ -0.41
SMG1-203ENST00000532700 PHYHIPLQ96FC7 376 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 FAM19A4Q96LR4 140 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 ZNF471Q9BX82 626 aaPredicted RBP12.47□□□□□ -0.41
SMG1-203ENST00000532700 AGPAT4-IT1Q9H0P7 198 aa12.47□□□□□ -0.41
SMG1-203ENST00000532700 PKD1P98161 4303 aa12.46□□□□□ -0.41
SMG1-203ENST00000532700 IGKV2-40A0A087WW87 121 aaPredicted RBP12.46□□□□□ -0.41
SMG1-203ENST00000532700 H7BYZ3 331 aa12.46□□□□□ -0.41
SMG1-203ENST00000532700 CXorf1O96002 111 aa12.46□□□□□ -0.41
SMG1-203ENST00000532700 IGKV2D-40P01614 121 aaPredicted RBP12.46□□□□□ -0.41
SMG1-203ENST00000532700 ARL14EPLP0DKL9 152 aa12.46□□□□□ -0.41
SMG1-203ENST00000532700 CD300CQ08708 224 aa12.46□□□□□ -0.41
SMG1-203ENST00000532700 FAM74A1Q5RGS3 127 aa12.46□□□□□ -0.41
SMG1-203ENST00000532700 LINC00612Q8N6U2 182 aa12.46□□□□□ -0.41
SMG1-203ENST00000532700 HYLS1Q96M11 299 aa12.46□□□□□ -0.41
SMG1-203ENST00000532700 Q9H3A6 140 aa12.46□□□□□ -0.41
SMG1-203ENST00000532700 HOXA5P20719 270 aa12.45□□□□□ -0.42
SMG1-203ENST00000532700 BTN1A1Q13410 526 aa12.45□□□□□ -0.42
SMG1-203ENST00000532700 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
SMG1-203ENST00000532700 ODF3Q96PU9 254 aa12.45□□□□□ -0.42
SMG1-203ENST00000532700 VGLL1Q99990 258 aa12.45□□□□□ -0.42
SMG1-203ENST00000532700 OTORQ9NRC9 128 aa12.45□□□□□ -0.42
SMG1-203ENST00000532700 TIMM8BQ9Y5J9 83 aaPredicted RBP12.45□□□□□ -0.42
SMG1-203ENST00000532700 KIAA1109Q2LD37 5005 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 CTXND1A0A1B0GTU2 59 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 CBY3A6NI87 242 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 ATP5G1P05496 136 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 SEC11BP0C7V7 166 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 GCHFRP30047 84 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 LEPP41159 167 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 ATP5G3P48201 142 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 LGALS9BQ3B8N2 356 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 LINC00477Q96M19 166 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms