RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 GAGE4Q13068 117 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 GAGE5Q13069 117 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 LINC00479Q96M42 142 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 SRCAPQ6ZRS2 3230 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 AZU1P20160 251 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 AMN1Q8IY45 258 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 TRBV19A0A075B6N1 114 aa11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 LYL1P12980 280 aa11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 LGALS1P09382 135 aaKnown RBP11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 C8orf49Q96NF6 230 aa11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 VPREB3Q9UKI3 123 aa11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 MUC6Q6W4X9 2439 aa11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 HOXB4P17483 251 aaPredicted RBP11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 C21orf62-AS1Q17RA5 79 aa11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 C8orf86Q6ZUL3 223 aa11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 HIST1H2BLQ99880 126 aa11.79□□□□□ -0.52
PCDHA9-202ENST00000532602 KNCNA6PVL3 124 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 KLK9Q9UKQ9 250 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 SMKR1H3BMG3 65 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 SLAQ13239 276 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 DMRTC2Q8IXT2 367 aaPredicted RBP11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 TTC28Q96AY4 2481 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 GSN-AS1Q9NRJ2 163 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 KLF2Q9Y5W3 355 aaPredicted RBP11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 A0A1B0GV72 72 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 DNAJC30Q96LL9 226 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 ANAPC10Q9UM13 185 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 EP400Q96L91 3159 aa11.78□□□□□ -0.52
PCDHA9-202ENST00000532602 DEFB113Q30KQ7 82 aa11.77□□□□□ -0.52
PCDHA9-202ENST00000532602 CT83Q5H943 113 aa11.77□□□□□ -0.52
PCDHA9-202ENST00000532602 TSSC4Q9Y5U2 329 aaPredicted RBP11.77□□□□□ -0.52
PCDHA9-202ENST00000532602 IGHV2-5P01817 119 aa11.77□□□□□ -0.52
PCDHA9-202ENST00000532602 CXCL1P09341 107 aa11.77□□□□□ -0.52
PCDHA9-202ENST00000532602 BDP1A6H8Y1 2624 aa11.77□□□□□ -0.53
PCDHA9-202ENST00000532602 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.53
PCDHA9-202ENST00000532602 TNFRSF6BO95407 300 aa11.77□□□□□ -0.53
PCDHA9-202ENST00000532602 GAGE12BA1L429 117 aa11.77□□□□□ -0.53
PCDHA9-202ENST00000532602 GAGE7O76087 117 aa11.77□□□□□ -0.53
PCDHA9-202ENST00000532602 GAGE12FP0CL80 117 aa11.77□□□□□ -0.53
PCDHA9-202ENST00000532602 GAGE12GP0CL81 117 aa11.77□□□□□ -0.53
PCDHA9-202ENST00000532602 GAGE12IP0CL82 117 aa11.77□□□□□ -0.53
PCDHA9-202ENST00000532602 C15orf65H3BRN8 121 aa11.77□□□□□ -0.53
PCDHA9-202ENST00000532602 A0A1B0GUS0 222 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 ZC2HC1BQ5TFG8 222 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 SPXQ9BT56 116 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 WISP2O76076 250 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 ADORA2A-AS1P86434 159 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 DEFB112Q30KQ8 113 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 FNDC4Q9H6D8 234 aaPredicted RBP11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 IGHV3-16A0A0C4DH30 117 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 KLF12Q9Y4X4 402 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 I3L3M4 83 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 IGHV7-4-1A0A0J9YVY3 117 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 C22orf46C9J442 243 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 IGHV4-59P01825 116 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 SAMD5Q5TGI4 173 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 TMEM243Q9BU79 118 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 TMEM14CQ9P0S9 112 aa11.76□□□□□ -0.53
PCDHA9-202ENST00000532602 PRSS46E5RG02 174 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 CTSZQ9UBR2 303 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 TRAV12-2A0A075B6T6 113 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 IGHV4-30-2A0A087WSY4 118 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 NEGR1Q7Z3B1 354 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 TMEM141Q96I45 108 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 C1orf147Q96MC9 270 aaPredicted RBP11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 ATP6V0BQ99437 205 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 IGFL2Q6UWQ7 119 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 C8orf31Q8N9H6 132 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 UBE2CO00762 179 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 HIST3H2BBQ8N257 126 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 ZFHX2Q9C0A1 2572 aaPredicted RBP11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 PAX9P55771 341 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 OBSL1O75147 1896 aa11.75□□□□□ -0.53
PCDHA9-202ENST00000532602 H3BRN7 92 aa11.74□□□□□ -0.53
PCDHA9-202ENST00000532602 VWC2Q2TAL6 325 aa11.74□□□□□ -0.53
PCDHA9-202ENST00000532602 ASPHD1Q5U4P2 390 aa11.74□□□□□ -0.53
PCDHA9-202ENST00000532602 NOTCH2Q04721 2471 aa11.74□□□□□ -0.53
PCDHA9-202ENST00000532602 DENND4AQ7Z401 1863 aa11.74□□□□□ -0.53
PCDHA9-202ENST00000532602 NKAPP1Q8N9T2 125 aa11.74□□□□□ -0.53
PCDHA9-202ENST00000532602 DKK4Q9UBT3 224 aa11.74□□□□□ -0.53
PCDHA9-202ENST00000532602 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
PCDHA9-202ENST00000532602 SYS1-DBNDD2H3BUS1 97 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 MRAPQ8TCY5 172 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 COLCA2A8K830 154 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 IGKV1-39P01597 117 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 IGHV2-70P01814 119 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 IGKV1D-39P04432 117 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 WT1-ASQ06250 92 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 IGHV4-61A0A0C4DH41 118 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 TP53TG1Q9Y2A0 90 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 ACACBO00763 2458 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 IGHV4-38-2P0DP08 117 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 ZNRF2Q8NHG8 242 aa11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 DLX4Q92988 240 aaPredicted RBP11.73□□□□□ -0.53
PCDHA9-202ENST00000532602 DEFB136Q30KP8 78 aa11.72□□□□□ -0.53
PCDHA9-202ENST00000532602 PRR25Q96S07 402 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms