RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 HIF1ANQ9NWT6 349 aa13□□□□□ -0.33
VPS26B-206ENST00000531741 HIVEP3Q5T1R4 2406 aa12.99□□□□□ -0.33
VPS26B-206ENST00000531741 PAX8Q06710 450 aa12.99□□□□□ -0.33
VPS26B-206ENST00000531741 TWIST1Q15672 202 aa12.99□□□□□ -0.33
VPS26B-206ENST00000531741 C19orf54Q5BKX5 351 aa12.99□□□□□ -0.33
VPS26B-206ENST00000531741 DPF1Q92782 380 aa12.99□□□□□ -0.33
VPS26B-206ENST00000531741 METTL26Q96S19 204 aa12.99□□□□□ -0.33
VPS26B-206ENST00000531741 LINC01548A6NM66 108 aa12.98□□□□□ -0.33
VPS26B-206ENST00000531741 PPBPP02775 128 aa12.98□□□□□ -0.33
VPS26B-206ENST00000531741 MOB4Q9Y3A3 225 aa12.98□□□□□ -0.33
VPS26B-206ENST00000531741 PRAC2D3DTV9 90 aa12.98□□□□□ -0.33
VPS26B-206ENST00000531741 ORM1P02763 201 aa12.98□□□□□ -0.33
VPS26B-206ENST00000531741 FAM106AQ4KMX7 169 aa12.98□□□□□ -0.33
VPS26B-206ENST00000531741 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
VPS26B-206ENST00000531741 LINC01546A6NGU7 62 aa12.97□□□□□ -0.33
VPS26B-206ENST00000531741 FAM223BA6NKX1 122 aa12.97□□□□□ -0.33
VPS26B-206ENST00000531741 CKS2P33552 79 aa12.97□□□□□ -0.33
VPS26B-206ENST00000531741 HIST1H1AQ02539 215 aaPredicted RBP12.97□□□□□ -0.33
VPS26B-206ENST00000531741 ATP5G2Q06055 141 aa12.97□□□□□ -0.33
VPS26B-206ENST00000531741 ERCC8Q13216 396 aa12.97□□□□□ -0.33
VPS26B-206ENST00000531741 FAM223AQ8IWN6 122 aa12.97□□□□□ -0.33
VPS26B-206ENST00000531741 COL6A6A6NMZ7 2263 aa12.97□□□□□ -0.33
VPS26B-206ENST00000531741 C19orf84I3L1E1 186 aa12.97□□□□□ -0.33
VPS26B-206ENST00000531741 LOXL1Q08397 574 aaPredicted RBP12.97□□□□□ -0.33
VPS26B-206ENST00000531741 SPTBN1Q01082 2364 aaKnown RBP12.96□□□□□ -0.33
VPS26B-206ENST00000531741 TRAV8-2A0A0B4J237 113 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 LOC389332A0A1B0GUA5 103 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 IGHV4-39P01824 125 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 HBDP02042 147 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 FOSL1P15407 271 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 LGALS9BQ3B8N2 356 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 LGALS9CQ6DKI2 356 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 RNF182Q8N6D2 247 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 RNF185Q96GF1 192 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 PMCHL2Q9BQD1 86 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 COX11Q9Y6N1 276 aa12.96□□□□□ -0.33
VPS26B-206ENST00000531741 TRAV41A0A0B4J266 112 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 NPYP01303 97 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 MCRIP2Q9BUT9 160 aaKnown RBP12.95□□□□□ -0.34
VPS26B-206ENST00000531741 AGPAT4-IT1Q9H0P7 198 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 IGHV1-69DA0A0B4J2H0 117 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 MUC21A0A0G2JKD1 596 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 MUC21A0A140T8X8 626 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 H0Y8G0 127 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 TCF21O43680 179 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 IGHV1-69P01742 117 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 COX8AP10176 69 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 C12orf54Q6X4T0 127 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 C9orf47Q6ZRZ4 202 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 IL17RELQ6ZVW7 336 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
VPS26B-206ENST00000531741 BRI3O95415 125 aa12.94□□□□□ -0.34
VPS26B-206ENST00000531741 NCR2O95944 276 aa12.94□□□□□ -0.34
VPS26B-206ENST00000531741 C8orf86Q6ZUL3 223 aa12.94□□□□□ -0.34
VPS26B-206ENST00000531741 PIFOQ8TCI5 191 aa12.94□□□□□ -0.34
VPS26B-206ENST00000531741 MEGF9Q9H1U4 602 aa12.94□□□□□ -0.34
VPS26B-206ENST00000531741 TIMM8BQ9Y5J9 83 aaPredicted RBP12.94□□□□□ -0.34
VPS26B-206ENST00000531741 UQCRFS1P47985 274 aa12.93□□□□□ -0.34
VPS26B-206ENST00000531741 MPV17L2Q567V2 206 aa12.93□□□□□ -0.34
VPS26B-206ENST00000531741 TMEM78Q5T7P6 136 aa12.93□□□□□ -0.34
VPS26B-206ENST00000531741 MAP1LC3AQ9H492 121 aa12.93□□□□□ -0.34
VPS26B-206ENST00000531741 MSRB1Q9NZV6 116 aa12.93□□□□□ -0.34
VPS26B-206ENST00000531741 MED13LQ71F56 2210 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 IGKV3D-20A0A0C4DH25 116 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 IGHV3-66A0A0C4DH42 116 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 GNLYP22749 145 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 BVES-AS1Q5T3Y7 98 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 OR8A1Q8NGG7 326 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 OR1N2Q8NGR9 330 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 SMKR1H3BMG3 65 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 IGF1P05019 195 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 PRSS57Q6UWY2 283 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 TMEM219Q86XT9 240 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 GLMPQ8WWB7 406 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 TP73-AS1Q9UF72 201 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 LENEPQ9Y5L5 61 aa12.92□□□□□ -0.34
VPS26B-206ENST00000531741 NUDT3O95989 172 aa12.91□□□□□ -0.34
VPS26B-206ENST00000531741 IFI27L1Q96BM0 104 aa12.91□□□□□ -0.34
VPS26B-206ENST00000531741 PIMREGQ9BSJ6 248 aa12.91□□□□□ -0.34
VPS26B-206ENST00000531741 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
VPS26B-206ENST00000531741 H3BUA1 57 aa12.9□□□□□ -0.34
VPS26B-206ENST00000531741 C9orf139Q6ZV77 190 aa12.9□□□□□ -0.34
VPS26B-206ENST00000531741 C11orf21Q9P2W6 132 aa12.9□□□□□ -0.34
VPS26B-206ENST00000531741 IGHV4-4A0A075B6R2 117 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 IGHV3OR16-13A0A075B7E8 117 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 IGHV3-74A0A0B4J1X5 117 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 NDUFS8O00217 210 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 TRGV3P03979 118 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 DEFB125Q8N687 156 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 NDUFA4O00483 81 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 ZNF207O43670 478 aaKnown RBP12.89□□□□□ -0.35
VPS26B-206ENST00000531741 TNFRSF6BO95407 300 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 ARL3P36405 182 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 UBE2V1Q13404 147 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 C10orf105Q8TEF2 133 aa12.89□□□□□ -0.35
VPS26B-206ENST00000531741 IGHV3-49A0A0A0MS15 119 aa12.88□□□□□ -0.35
VPS26B-206ENST00000531741 IGHV4-61A0A0C4DH41 118 aa12.88□□□□□ -0.35
VPS26B-206ENST00000531741 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
VPS26B-206ENST00000531741 FGF6P10767 208 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms