RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 PPDPFLQ8WWR9 84 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 NDUFS6O75380 124 aaKnown RBP11.69□□□□□ -0.54
LRRK1-207ENST00000531270 WFDC9Q8NEX5 89 aa11.68□□□□□ -0.54
LRRK1-207ENST00000531270 IGLV10-54A0A075B6I4 117 aa11.68□□□□□ -0.54
LRRK1-207ENST00000531270 NDUFA4O00483 81 aa11.68□□□□□ -0.54
LRRK1-207ENST00000531270 INTS1Q8N201 2190 aaKnown RBP11.68□□□□□ -0.54
LRRK1-207ENST00000531270 MYOFQ9NZM1 2061 aa11.68□□□□□ -0.54
LRRK1-207ENST00000531270 YPEL3P61236 119 aaPredicted RBP11.68□□□□□ -0.54
LRRK1-207ENST00000531270 ARTNQ5T4W7 220 aa11.68□□□□□ -0.54
LRRK1-207ENST00000531270 ZNF134P52741 427 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 C1orf43Q9BWL3 253 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 COL4A5P29400 1685 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 ETDBQ3ZM63 59 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 MRPL35Q9NZE8 188 aaKnown RBP11.67□□□□□ -0.54
LRRK1-207ENST00000531270 POLR3KQ9Y2Y1 108 aaPredicted RBP11.67□□□□□ -0.54
LRRK1-207ENST00000531270 CACNA1IQ9P0X4 2223 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 A8MWP6 167 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 DEFB136Q30KP8 78 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 ESM1Q9NQ30 184 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 ZNF492Q9P255 531 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 U3KQE9 123 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 PRO1854Q9UHT4 67 aa11.67□□□□□ -0.54
LRRK1-207ENST00000531270 TRBV6-6A0A0A6YYG2 114 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 B3GALT5-AS1P59052 145 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 C5orf38Q86SI9 138 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 TMEM258P61165 79 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 F6UB75 175 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 ANKRD29Q8N6D5 301 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 C9orf118A6NHY6 69 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 CACNA1GO43497 2377 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 RHOHQ15669 191 aa11.66□□□□□ -0.54
LRRK1-207ENST00000531270 ABCA7Q8IZY2 2146 aa11.65□□□□□ -0.54
LRRK1-207ENST00000531270 SPRY2O43597 315 aa11.65□□□□□ -0.54
LRRK1-207ENST00000531270 C14orf132Q9NPU4 83 aa11.65□□□□□ -0.54
LRRK1-207ENST00000531270 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.54
LRRK1-207ENST00000531270 NDUFA4L2Q9NRX3 87 aa11.65□□□□□ -0.54
LRRK1-207ENST00000531270 WDR86Q86TI4 376 aa11.65□□□□□ -0.54
LRRK1-207ENST00000531270 APRG1Q8IVJ8 170 aa11.65□□□□□ -0.54
LRRK1-207ENST00000531270 PRR25Q96S07 402 aa11.65□□□□□ -0.54
LRRK1-207ENST00000531270 J3QQQ9 107 aa11.65□□□□□ -0.54
LRRK1-207ENST00000531270 GNRH2O43555 120 aa11.65□□□□□ -0.54
LRRK1-207ENST00000531270 DOPEY2Q9Y3R5 2298 aa11.65□□□□□ -0.55
LRRK1-207ENST00000531270 PTPRFP10586 1907 aa11.65□□□□□ -0.55
LRRK1-207ENST00000531270 TRAV4A0A0B4J268 109 aa11.65□□□□□ -0.55
LRRK1-207ENST00000531270 IGHV7-4-1A0A0J9YVY3 117 aa11.65□□□□□ -0.55
LRRK1-207ENST00000531270 NPYP01303 97 aa11.65□□□□□ -0.55
LRRK1-207ENST00000531270 CEND1Q8N111 149 aa11.65□□□□□ -0.55
LRRK1-207ENST00000531270 OR11H6Q8NGC7 330 aa11.65□□□□□ -0.55
LRRK1-207ENST00000531270 CAMK2N2Q96S95 79 aa11.65□□□□□ -0.55
LRRK1-207ENST00000531270 C8orf31Q8N9H6 132 aa11.64□□□□□ -0.55
LRRK1-207ENST00000531270 K7ENP7 123 aa11.64□□□□□ -0.55
LRRK1-207ENST00000531270 FNDC10F2Z333 226 aa11.64□□□□□ -0.55
LRRK1-207ENST00000531270 REG4Q9BYZ8 158 aa11.64□□□□□ -0.55
LRRK1-207ENST00000531270 SIGLEC8Q9NYZ4 499 aa11.64□□□□□ -0.55
LRRK1-207ENST00000531270 ORMDL1Q9P0S3 153 aa11.64□□□□□ -0.55
LRRK1-207ENST00000531270 MRPL53Q96EL3 112 aaKnown RBP11.64□□□□□ -0.55
LRRK1-207ENST00000531270 ARFGEF3Q5TH69 2177 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 H3BRN7 92 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 Q9H8V8 135 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 UBE2AP49459 152 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 PIFOQ8TCI5 191 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 CEP290O15078 2479 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 IGHG2P01859 326 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 C4orf48Q5BLP8 95 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 TMEM14BQ9NUH8 114 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 H3BMG7 143 aa11.63□□□□□ -0.55
LRRK1-207ENST00000531270 CACNA1DQ01668 2161 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 KIF13BQ9NQT8 1826 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 BAALC-AS2P0C853 105 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 FUSP35637 526 aaKnown RBP eCLIP11.62□□□□□ -0.55
LRRK1-207ENST00000531270 ZNF833PQ6ZTB9 187 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 F8W735 103 aaPredicted RBP11.62□□□□□ -0.55
LRRK1-207ENST00000531270 IGLC2P0DOY2 106 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 IGLC3P0DOY3 106 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 ZC2HC1AQ96GY0 325 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 HLA-DMBP28068 263 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 DIAPH2-AS1Q14236 149 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 CCL24O00175 119 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 IGFBPL1Q8WX77 278 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 TUBGCP6Q96RT7 1819 aa11.62□□□□□ -0.55
LRRK1-207ENST00000531270 J3QLI3 93 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 Q0VG73 95 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 QRFPP83859 136 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 AMTNQ6UX39 209 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 NTN5Q8WTR8 489 aaPredicted RBP11.61□□□□□ -0.55
LRRK1-207ENST00000531270 DIDO1Q9BTC0 2240 aaKnown RBP11.61□□□□□ -0.55
LRRK1-207ENST00000531270 NDUFB1O75438 58 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 ZDBF2Q9HCK1 2354 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 CCL18P55774 89 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 FAM186AA6NE01 2351 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 F8W1H4 67 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 COX7B2Q8TF08 81 aa11.61□□□□□ -0.55
LRRK1-207ENST00000531270 GYPEP15421 78 aa11.6□□□□□ -0.55
LRRK1-207ENST00000531270 DEFB112Q30KQ8 113 aa11.6□□□□□ -0.55
LRRK1-207ENST00000531270 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
LRRK1-207ENST00000531270 ATAD5Q96QE3 1844 aa11.6□□□□□ -0.55
LRRK1-207ENST00000531270 DKK2Q9UBU2 259 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms