RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
CTSB-220ENST00000531089 YTHDF2Q9Y5A9 579 aaKnown RBP11.05□□□□□ -0.64
CTSB-220ENST00000531089 PRM2P04554 102 aa11.04□□□□□ -0.64
CTSB-220ENST00000531089 TAS2R60P59551 318 aa11.04□□□□□ -0.64
CTSB-220ENST00000531089 RANP62826 216 aaKnown RBP11.04□□□□□ -0.64
CTSB-220ENST00000531089 UBE2L3P68036 154 aaKnown RBP11.04□□□□□ -0.64
CTSB-220ENST00000531089 HSD17B11Q8NBQ5 300 aa11.04□□□□□ -0.64
CTSB-220ENST00000531089 OR10G4Q8NGN3 311 aa11.04□□□□□ -0.64
CTSB-220ENST00000531089 OR10G9Q8NGN4 311 aa11.04□□□□□ -0.64
CTSB-220ENST00000531089 OR10G7Q8NGN6 311 aa11.04□□□□□ -0.64
CTSB-220ENST00000531089 ZNF503Q96F45 646 aa11.04□□□□□ -0.64
CTSB-220ENST00000531089 PLA2G2EQ9NZK7 142 aa11.04□□□□□ -0.64
CTSB-220ENST00000531089 TNFSF18Q9UNG2 199 aa11.04□□□□□ -0.64
CTSB-220ENST00000531089 H7BYZ3 331 aa11.03□□□□□ -0.64
CTSB-220ENST00000531089 CSN1S1P47710 185 aa11.03□□□□□ -0.64
CTSB-220ENST00000531089 SERF2P84101 59 aa11.03□□□□□ -0.64
CTSB-220ENST00000531089 IFITM2Q01629 132 aa11.03□□□□□ -0.64
CTSB-220ENST00000531089 ERCC8Q13216 396 aa11.03□□□□□ -0.64
CTSB-220ENST00000531089 PSMG3Q9BT73 122 aaPredicted RBP11.03□□□□□ -0.64
CTSB-220ENST00000531089 BORCS7-ASMTA0A0B4J1R7 106 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 J3KRW8 73 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 MBP02144 154 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 AZU1P20160 251 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 ATP6V0CP27449 155 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 RAB2AP61019 212 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 KIR3DS1Q14943 382 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 PQLC2Q6ZP29 291 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 C9orf47Q6ZRZ4 202 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 AKAP14Q86UN6 197 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 CCDC28AQ8IWP9 274 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 LINC00469Q8N7U9 141 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 OR2G3Q8NGZ4 309 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 PHYHIPLQ96FC7 376 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 AGPAT4-IT1Q9H0P7 198 aa11.02□□□□□ -0.64
CTSB-220ENST00000531089 RNF222A6NCQ9 220 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 TMEM78Q5T7P6 136 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 GFI1BQ5VTD9 330 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 ZNF493Q6ZR52 646 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 POM121L12Q8N7R1 296 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 NDUFAF3Q9BU61 184 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 KRTAP17-1Q9BYP8 105 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 Q9H3A6 140 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 LYRM9A8MSI8 78 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 EIF3GO75821 320 aaKnown RBP eCLIP11.01□□□□□ -0.65
CTSB-220ENST00000531089 SLC25A5P05141 298 aaKnown RBP11.01□□□□□ -0.65
CTSB-220ENST00000531089 DAD1P61803 113 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 FAM74A1Q5RGS3 127 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 RPL7L1Q6DKI1 246 aaKnown RBP11.01□□□□□ -0.65
CTSB-220ENST00000531089 RXFP4Q8TDU9 374 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 GNPNAT1Q96EK6 184 aaPredicted RBP11.01□□□□□ -0.65
CTSB-220ENST00000531089 C16orf74Q96GX8 76 aa11.01□□□□□ -0.65
CTSB-220ENST00000531089 KIAA1109Q2LD37 5005 aa11□□□□□ -0.65
CTSB-220ENST00000531089 IGKV2-40A0A087WW87 121 aaPredicted RBP11□□□□□ -0.65
CTSB-220ENST00000531089 TAAR5O14804 337 aa11□□□□□ -0.65
CTSB-220ENST00000531089 HMGB3O15347 200 aaKnown RBP11□□□□□ -0.65
CTSB-220ENST00000531089 IGKV2D-40P01614 121 aaPredicted RBP11□□□□□ -0.65
CTSB-220ENST00000531089 CDC34P49427 236 aaPredicted RBP11□□□□□ -0.65
CTSB-220ENST00000531089 VGLL1Q99990 258 aa11□□□□□ -0.65
CTSB-220ENST00000531089 PKD1P98161 4303 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 PGPA6NDG6 321 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 G3V3Q6 166 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 ARPC5O15511 151 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 GPX1P07203 203 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 NMBP08949 121 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 P0DMU3 169 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 FAM231AP0DMU4 169 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 FAM231CP0DMU5 169 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 TMEM263Q8WUH6 116 aaKnown RBP10.99□□□□□ -0.65
CTSB-220ENST00000531089 FAM19A4Q96LR4 140 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 HYLS1Q96M11 299 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 ZNF492Q9P255 531 aa10.99□□□□□ -0.65
CTSB-220ENST00000531089 TIMM8BQ9Y5J9 83 aaPredicted RBP10.99□□□□□ -0.65
CTSB-220ENST00000531089 PKHD1P08F94 4074 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 C7orf71A4D174 169 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 RBAKDNA6NC62 111 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 STAG3L2P0CL84 134 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 STAG3L3P0CL85 134 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 RNASE4P34096 147 aaKnown RBP10.98□□□□□ -0.65
CTSB-220ENST00000531089 ZNF138P52744 262 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 CMTM2Q8TAZ6 248 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 RAB24Q969Q5 203 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 PYGO2Q9BRQ0 406 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 ACTR3CQ9C0K3 210 aaPredicted RBP10.98□□□□□ -0.65
CTSB-220ENST00000531089 SH3BGRL3Q9H299 93 aa10.98□□□□□ -0.65
CTSB-220ENST00000531089 PLAC8L1A1L4L8 177 aa10.97□□□□□ -0.65
CTSB-220ENST00000531089 KLLNB2CW77 178 aa10.97□□□□□ -0.65
CTSB-220ENST00000531089 DIRC3C9JPN6 131 aa10.97□□□□□ -0.65
CTSB-220ENST00000531089 ARL14EPLP0DKL9 152 aa10.97□□□□□ -0.65
CTSB-220ENST00000531089 DEFB130BP0DP73 79 aa10.97□□□□□ -0.65
CTSB-220ENST00000531089 DEFB130AP0DP74 79 aa10.97□□□□□ -0.65
CTSB-220ENST00000531089 HTN3P15516 51 aa10.97□□□□□ -0.65
CTSB-220ENST00000531089 CRISP2P16562 243 aa10.97□□□□□ -0.65
CTSB-220ENST00000531089 RNASE8Q8TDE3 154 aaKnown RBP10.97□□□□□ -0.65
CTSB-220ENST00000531089 FAM210BQ96KR6 192 aa10.97□□□□□ -0.65
CTSB-220ENST00000531089 NACAE9PAV3 2078 aa10.96□□□□□ -0.65
CTSB-220ENST00000531089 TRBV7-9A0A0J9YWB2 115 aa10.96□□□□□ -0.65
CTSB-220ENST00000531089 SMLR1H3BR10 107 aa10.96□□□□□ -0.65
CTSB-220ENST00000531089 ZNF324O75467 553 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms