RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 DYNLRB2Q8TF09 96 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 TRAV41A0A0B4J266 112 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 IGKV3OR2-268A0A0C4DH90 116 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 FAM106AQ4KMX7 169 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 TMEM170BQ5T4T1 132 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 IL17RELQ6ZVW7 336 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 BCL6BQ8N143 479 aaPredicted RBP9.78□□□□□ -0.84
SCN3B-206ENST00000530277 C14orf178Q8N769 122 aaPredicted RBP9.78□□□□□ -0.84
SCN3B-206ENST00000530277 PRRC2AP48634 2157 aaKnown RBP9.78□□□□□ -0.84
SCN3B-206ENST00000530277 IGHV3-64A0A075B6Q5 118 aa9.77□□□□□ -0.84
SCN3B-206ENST00000530277 IGHV3-73A0A0B4J1V6 119 aa9.77□□□□□ -0.84
SCN3B-206ENST00000530277 CD7P09564 240 aa9.77□□□□□ -0.84
SCN3B-206ENST00000530277 EBLN2Q6P2I7 272 aa9.77□□□□□ -0.84
SCN3B-206ENST00000530277 LINC00322Q6ZN03 302 aaPredicted RBP9.77□□□□□ -0.84
SCN3B-206ENST00000530277 MSRB1Q9NZV6 116 aa9.77□□□□□ -0.84
SCN3B-206ENST00000530277 FCN3O75636 299 aa9.77□□□□□ -0.85
SCN3B-206ENST00000530277 EFNA4P52798 201 aa9.77□□□□□ -0.85
SCN3B-206ENST00000530277 OVOL3O00110 214 aa9.77□□□□□ -0.85
SCN3B-206ENST00000530277 HBDP02042 147 aa9.77□□□□□ -0.85
SCN3B-206ENST00000530277 GATA1P15976 413 aaPredicted RBP9.77□□□□□ -0.85
SCN3B-206ENST00000530277 UBE2V1Q13404 147 aa9.77□□□□□ -0.85
SCN3B-206ENST00000530277 LINC00477Q96M19 166 aa9.77□□□□□ -0.85
SCN3B-206ENST00000530277 NHP2Q9NX24 153 aaKnown RBP9.77□□□□□ -0.85
SCN3B-206ENST00000530277 SMIM27A0A1W2PRY6 76 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 F6UB75 175 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 NPFFO15130 113 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 IGLC2P0DOY2 106 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 IGLC3P0DOY3 106 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 PSMB2P49721 201 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 RPS20P60866 119 aaKnown RBP9.76□□□□□ -0.85
SCN3B-206ENST00000530277 SCGB3A1Q96QR1 104 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 FNDC10F2Z333 226 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 IGKV3D-20A0A0C4DH25 116 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 IGHV1-24A0A0C4DH33 117 aa9.76□□□□□ -0.85
SCN3B-206ENST00000530277 EIF4EBP1Q13541 118 aaPredicted RBP9.76□□□□□ -0.85
SCN3B-206ENST00000530277 PSMB11A5LHX3 300 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 APOMO95445 188 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 ATP5L2Q7Z4Y8 100 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 COL25A1Q9BXS0 654 aaPredicted RBP9.75□□□□□ -0.85
SCN3B-206ENST00000530277 BEX4Q9NWD9 120 aaPredicted RBP9.75□□□□□ -0.85
SCN3B-206ENST00000530277 SIGLEC15Q6ZMC9 328 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 YPEL4Q96NS1 127 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 MSRB2Q9Y3D2 182 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 ID1P41134 155 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 TMEM95Q3KNT9 176 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 PSMG4Q5JS54 123 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 GTSF1Q8WW33 167 aa9.75□□□□□ -0.85
SCN3B-206ENST00000530277 SOX21Q9Y651 276 aaPredicted RBP9.75□□□□□ -0.85
SCN3B-206ENST00000530277 A0A087WWL8 130 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 IGLV2-23P01705 113 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 ASIPP42127 132 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 MTURNQ8N3F0 131 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 GTSF1LQ9H1H1 148 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 TACC2O95359 2948 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 TRAV12-3A0A0B4J271 114 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 K7EIM0 57 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 COX6B1P14854 86 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 IGKV1D-37A0A075B6S9 117 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 LINC00311Q8N616 119 aa9.74□□□□□ -0.85
SCN3B-206ENST00000530277 OR11H12B2RN74 326 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 K7EMI3 77 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 OR11H1Q8NG94 326 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 OR11H2Q8NH07 326 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 TMEM158Q8WZ71 300 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 COL12A1Q99715 3063 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 PRSS46E5RG02 174 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 FABP2P12104 132 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 CD300EQ496F6 205 aaPredicted RBP9.73□□□□□ -0.85
SCN3B-206ENST00000530277 NPFFR1Q9GZQ6 430 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 ZFP36P26651 326 aaKnown RBP9.73□□□□□ -0.85
SCN3B-206ENST00000530277 CDSNQ15517 529 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 COA6Q5JTJ3 125 aaKnown RBP9.73□□□□□ -0.85
SCN3B-206ENST00000530277 ITLN2Q8WWU7 325 aaPredicted RBP9.73□□□□□ -0.85
SCN3B-206ENST00000530277 KAAG1Q9UBP8 84 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 COX11Q9Y6N1 276 aa9.73□□□□□ -0.85
SCN3B-206ENST00000530277 A0A0U1RRA0 63 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 NPYP01303 97 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 GP9P14770 177 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 ZC2HC1BQ5TFG8 222 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 Q6AWC8 147 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 Q8N7P7 452 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 THAP8Q8NA92 274 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 OR4X2Q8NGF9 303 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 C1orf159Q96HA4 380 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 PRR25Q96S07 402 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 TTTY13Q9BZ97 58 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 CST9LQ9H4G1 147 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
SCN3B-206ENST00000530277 LINC01548A6NM66 108 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 IGLV1-47P01700 117 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 RAB9AP51151 201 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 CHCHD1Q96BP2 118 aaKnown RBP9.72□□□□□ -0.85
SCN3B-206ENST00000530277 C20orf144Q9BQM9 153 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 NCOR1P1Q9H4R4 102 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 TET2Q6N021 2002 aaPredicted RBP9.72□□□□□ -0.85
SCN3B-206ENST00000530277 EGR2P11161 476 aaPredicted RBP9.72□□□□□ -0.85
SCN3B-206ENST00000530277 DYNAPQ8N1N2 210 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 RNF114Q9Y508 228 aa9.72□□□□□ -0.85
SCN3B-206ENST00000530277 GAGE12BA1L429 117 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms