RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 NPIPB6E9PJ23 425 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 J3KRW8 73 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 TAAR5O14804 337 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 ATP6V0CP27449 155 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 RAB2AP61019 212 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 ERCC8Q13216 396 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 FAM222AQ5U5X8 452 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 ZNF767PQ75MW2 155 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 OR2G3Q8NGZ4 309 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 CMTM2Q8TAZ6 248 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 NIPSNAP3BQ9BS92 247 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 DKK2Q9UBU2 259 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 CELA1Q9UNI1 258 aa8.69□□□□□ -1.02
SDHD-205ENST00000528048 ARPC5O15511 151 aa8.68□□□□□ -1.02
SDHD-205ENST00000528048 PAX4O43316 350 aa8.68□□□□□ -1.02
SDHD-205ENST00000528048 SLC25A5P05141 298 aaKnown RBP8.68□□□□□ -1.02
SDHD-205ENST00000528048 CDC34P49427 236 aaPredicted RBP8.68□□□□□ -1.02
SDHD-205ENST00000528048 DAD1P61803 113 aa8.68□□□□□ -1.02
SDHD-205ENST00000528048 RPL7L1Q6DKI1 246 aaKnown RBP8.68□□□□□ -1.02
SDHD-205ENST00000528048 KRTAP19-1Q8IUB9 90 aa8.68□□□□□ -1.02
SDHD-205ENST00000528048 HYLS1Q96M11 299 aa8.68□□□□□ -1.02
SDHD-205ENST00000528048 ACTR3CQ9C0K3 210 aaPredicted RBP8.68□□□□□ -1.02
SDHD-205ENST00000528048 AGPAT4-IT1Q9H0P7 198 aa8.68□□□□□ -1.02
SDHD-205ENST00000528048 Q9H3A6 140 aa8.68□□□□□ -1.02
SDHD-205ENST00000528048 TRAV12-3A0A0B4J271 114 aa8.67□□□□□ -1.02
SDHD-205ENST00000528048 PGPA6NDG6 321 aa8.67□□□□□ -1.02
SDHD-205ENST00000528048 LYRM9A8MSI8 78 aa8.67□□□□□ -1.02
SDHD-205ENST00000528048 HMGB3O15347 200 aaKnown RBP8.67□□□□□ -1.02
SDHD-205ENST00000528048 GPX1P07203 203 aa8.67□□□□□ -1.02
SDHD-205ENST00000528048 GFI1BQ5VTD9 330 aa8.67□□□□□ -1.02
SDHD-205ENST00000528048 ZNF493Q6ZR52 646 aa8.67□□□□□ -1.02
SDHD-205ENST00000528048 C9orf47Q6ZRZ4 202 aa8.67□□□□□ -1.02
SDHD-205ENST00000528048 PHYHIPLQ96FC7 376 aa8.67□□□□□ -1.02
SDHD-205ENST00000528048 C16orf74Q96GX8 76 aa8.67□□□□□ -1.02
SDHD-205ENST00000528048 KMT2CQ8NEZ4 4911 aaKnown RBP8.67□□□□□ -1.02
SDHD-205ENST00000528048 IGKV2-40A0A087WW87 121 aaPredicted RBP8.66□□□□□ -1.02
SDHD-205ENST00000528048 RNF222A6NCQ9 220 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 EIF3GO75821 320 aaKnown RBP eCLIP8.66□□□□□ -1.02
SDHD-205ENST00000528048 IGKV2D-40P01614 121 aaPredicted RBP8.66□□□□□ -1.02
SDHD-205ENST00000528048 PRM2P04554 102 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 NMBP08949 121 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 HTN3P15516 51 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 AZU1P20160 251 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 RNASE4P34096 147 aaKnown RBP8.66□□□□□ -1.02
SDHD-205ENST00000528048 ZNF138P52744 262 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 RAB24Q969Q5 203 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 ZNF503Q96F45 646 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 OTORQ9NRC9 128 aa8.66□□□□□ -1.02
SDHD-205ENST00000528048 TIMM8BQ9Y5J9 83 aaPredicted RBP8.66□□□□□ -1.02
SDHD-205ENST00000528048 C7orf71A4D174 169 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 RBAKDNA6NC62 111 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 SMLR1H3BR10 107 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 CXorf1O96002 111 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 DEFB130BP0DP73 79 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 DEFB130AP0DP74 79 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 KIR3DS1Q14943 382 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 AKR1C8PQ5T2L2 129 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 IQCF2Q8IXL9 164 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 VGLL1Q99990 258 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 PYGO2Q9BRQ0 406 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 KRTAP9-9Q9BYP9 154 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 KRTAP9-4Q9BYQ2 154 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 SH3BGRL3Q9H299 93 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 TMEM167BQ9NRX6 74 aa8.65□□□□□ -1.02
SDHD-205ENST00000528048 STARD9Q9P2P6 4700 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 IGHV4-4A0A075B6R2 117 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 TRBV7-9A0A0J9YWB2 115 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 SNURFLB1AK76 121 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 DIRC3C9JPN6 131 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 STAG3L2P0CL84 134 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 STAG3L3P0CL85 134 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 ARL14EPLP0DKL9 152 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 LGALS9CQ6DKI2 356 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 ARL6IP6Q8N6S5 226 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 TMEM263Q8WUH6 116 aaKnown RBP8.64□□□□□ -1.03
SDHD-205ENST00000528048 FAM210BQ96KR6 192 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 NDUFAF3Q9BU61 184 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 NOP10Q9NPE3 64 aaKnown RBP8.64□□□□□ -1.03
SDHD-205ENST00000528048 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 RPH3ALQ9UNE2 315 aa8.64□□□□□ -1.03
SDHD-205ENST00000528048 A0A0D9SG52 128 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 CBY3A6NI87 242 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 HMSDA8MTL9 139 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 KLLNB2CW77 178 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 K7EQM0 130 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 RGS13O14921 159 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 CRISP2P16562 243 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 GCHFRP30047 84 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 ARPC5LQ9BPX5 153 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 APLNQ9ULZ1 77 aa8.63□□□□□ -1.03
SDHD-205ENST00000528048 DYNC2H1Q8NCM8 4307 aaKnown RBP8.63□□□□□ -1.03
SDHD-205ENST00000528048 AGRNO00468 2067 aa8.62□□□□□ -1.03
SDHD-205ENST00000528048 KANTRA0A1W2PQU2 76 aa8.62□□□□□ -1.03
SDHD-205ENST00000528048 G3V3Q6 166 aa8.62□□□□□ -1.03
SDHD-205ENST00000528048 EIF5AP63241 154 aaKnown RBP8.62□□□□□ -1.03
SDHD-205ENST00000528048 CD300CQ08708 224 aa8.62□□□□□ -1.03
SDHD-205ENST00000528048 GOLT1AQ6ZVE7 132 aa8.62□□□□□ -1.03
SDHD-205ENST00000528048 KCNRGQ8N5I3 272 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms