RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 NEXN-AS1Q8NBZ9 246 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 UBE2WQ96B02 151 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 CNRIP1Q96F85 164 aaPredicted RBP2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 CYYR1Q96J86 154 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 IGF2BP2-AS1Q96M15 143 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 DSCR8Q96T75 97 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 UPK3BQ9BT76 320 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 PRRG4Q9BZD6 226 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 DPH3P1Q9H4G8 78 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 HEATR1Q9H583 2144 aaKnown RBP2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 LINC00527Q9UJ94 153 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 WDR83OSQ9Y284 106 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 MYO7AQ13402 2215 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 MPDZO75970 2070 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 TRGV5A0A0B4J1U4 118 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 TRAV26-2A0A0B4J265 109 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 LOC107984156A0A0G2JMH3 177 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 PGPA6NDG6 321 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 PMS2P5A8MQ11 134 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 INAFM1C9JVW0 142 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 K7EQS6 105 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 PRYO14603 147 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 ARL14EPLP0DKL9 152 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 CA6P23280 308 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 MYCNOSP40205 109 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 GFERP55789 205 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 NPC2P61916 151 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 MRPS36P82909 103 aaKnown RBP2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 RPL18Q07020 188 aaKnown RBP2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 ZNF56Q15929 161 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM201AQ5SY85 155 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 CEMP1Q6PRD7 247 aaPredicted RBP2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 CD164L2Q6UWJ8 174 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 IGFL2Q6UWQ7 119 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 SDIM1Q6ZPB5 146 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 Q6ZR03 302 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 Q6ZRU5 148 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 ARL17AQ8IVW1 177 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 SERP2Q8N6R1 65 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 Q8N7P7 452 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 WDR31Q8NA23 367 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 HIST1H4GQ99525 98 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 GFRA4Q9GZZ7 299 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 AAMDCQ9H7C9 122 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 NXT2Q9NPJ8 142 aaKnown RBP2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 TMEM167BQ9NRX6 74 aa2.84□□□□□ -1.95
CLNS1A-209ENST00000527299 SHANK1Q9Y566 2161 aa2.84□□□□□ -1.96
CLNS1A-209ENST00000527299 CACNA1CQ13936 2221 aa2.84□□□□□ -1.96
CLNS1A-209ENST00000527299 TMSB15BA0A087X1C1 80 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 A0A096LNJ9 63 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 IGKV2D-26A0A0A0MRZ7 120 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 IGLV1-36A0A0B4J1U3 117 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 A0A0G2JRQ6 117 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 TRBV10-2A0A0K0K1G8 114 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 LILRA5A6NI73 299 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 LINC01549A6NIU2 74 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 H3BT86 120 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 H3BVH4 76 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 UPK2O00526 184 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 LYZL6O75951 148 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 WISP2O76076 250 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 HBDP02042 147 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 IAPPP10997 89 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 LIFP15018 202 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 CCL1P22362 96 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 POLR2LP62875 67 aaKnown RBP2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 TFF3Q07654 80 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF816Q0VGE8 651 aaPredicted RBP2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 TMEM155Q4W5P6 130 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 SPANXN5Q5MJ07 72 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 PLPP4Q5VZY2 271 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 ZFP2Q6ZN57 461 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 GTSCR1Q86UQ5 136 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 PRR15Q8IV56 129 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 TDHQ8IZJ6 230 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 ZCCHC24Q8N2G6 241 aaKnown RBP2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 OR8A1Q8NGG7 326 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 BORCS8Q96FH0 119 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 SMIM14Q96QK8 99 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 PLEKHA3Q9HB20 300 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 CALYQ9NYX4 217 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF492Q9P255 531 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 RPUSD1Q9UJJ7 312 aaKnown RBP2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 ADAMTS9Q9P2N4 1935 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 EML6Q6ZMW3 1958 aa2.83□□□□□ -1.96
CLNS1A-209ENST00000527299 COL5A1P20908 1838 aaPredicted RBP2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 A0A0U1RQV1 116 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 WI2-2373I1.2A0A1W2PRP0 233 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 LINC01546A6NGU7 62 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 HIGD1CA8MV81 97 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 PEX7O00628 323 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 MRPS12O15235 138 aaKnown RBP2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 CCL16O15467 120 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 SCRG1O75711 98 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 IGLV2-11P01706 119 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF883P0CG24 379 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 GP9P14770 177 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 GATA1P15976 413 aaPredicted RBP2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 HOXD3P31249 432 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms