RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 PDE6HQ13956 83 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 ICAM4Q14773 271 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 PRR9Q5T870 116 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 RNF141Q8WVD5 230 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 OR51M1Q9H341 326 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 WFDC1Q9HC57 220 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 FUT9Q9Y231 359 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 PRELID1Q9Y255 219 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 HSPB11Q9Y547 144 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 GAGE12BA1L429 117 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 C7orf71A4D174 169 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 PRSS29PA6NIE9 313 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 EIF3GO75821 320 aaKnown RBP eCLIP7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 GAGE7O76087 117 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 SLC25A5P05141 298 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 OR10J4P0C629 311 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 GAGE12FP0CL80 117 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 GAGE12GP0CL81 117 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 GAGE12IP0CL82 117 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 CRISP2P16562 243 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 FAM122CQ6P4D5 195 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 C9orf47Q6ZRZ4 202 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 CCDC28AQ8IWP9 274 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 ZFAND2AQ8N6M9 145 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 C11orf72Q8NBR9 251 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 ZNRF2Q8NHG8 242 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 PHYHIPLQ96FC7 376 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 LINC00477Q96M19 166 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 ATP5SQ99766 215 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 PAXXQ9BUH6 204 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 SMIM3Q9BZL3 60 aa7.28□□□□□ -1.24
PRPF40B-204ENST00000527253 RPL12P30050 165 aaKnown RBP7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 DEFA1P59665 94 aa7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 DEFA3P59666 94 aa7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 Q6ZTI0 123 aa7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 PYGO2Q9BRQ0 406 aa7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 LINC00467Q9BRT7 94 aa7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 MRPL32Q9BYC8 188 aaKnown RBP7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 GSN-AS1Q9NRJ2 163 aa7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 MBD2Q9UBB5 411 aa7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 LINC00588Q9Y4M8 146 aa7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 DNAH11Q96DT5 4516 aa7.27□□□□□ -1.25
PRPF40B-204ENST00000527253 DYNC1H1Q14204 4646 aaKnown RBP7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 TRAV26-1A0A087WT03 109 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 A0A0J9YY99 117 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 C17orf112F2Z3M2 114 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 FAM3BP58499 235 aaPredicted RBP7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 DAZ2Q13117 558 aaKnown RBP7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 OR5I1Q13606 314 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 FFAR4Q5NUL3 377 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 KRTAP17-1Q9BYP8 105 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 AAMDCQ9H7C9 122 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 ZNF492Q9P255 531 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 TP53TG3Q9ULZ0 132 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 ALG5Q9Y673 324 aa7.26□□□□□ -1.25
PRPF40B-204ENST00000527253 SNURFLB1AK76 121 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 GPX1P07203 203 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 RANP62826 216 aaKnown RBP7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 ANXA2RQ3ZCQ2 193 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 Q8TAT8 98 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 ATG101Q9BSB4 218 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 TMPRSS5Q9H3S3 457 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 BATF3Q9NR55 127 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 KCNIP2Q9NS61 270 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 PKD1P98161 4303 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 MUC4Q99102 2169 aa7.25□□□□□ -1.25
PRPF40B-204ENST00000527253 NBDYA0A0U1RRE5 68 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 OR7C2O60412 319 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 IFNA5P01569 189 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 NMBP08949 121 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 M6PRP20645 277 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 ZNF138P52744 262 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 TMEM78Q5T7P6 136 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 C1orf134Q5TEV5 83 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 EIF4E3Q8N5X7 224 aaKnown RBP7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 SCGB1C1Q8TD33 95 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 RXFP4Q8TDU9 374 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 GNPNAT1Q96EK6 184 aaPredicted RBP7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 VSIG2Q96IQ7 327 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 Q9H3A6 140 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 PKHD1P08F94 4074 aa7.24□□□□□ -1.25
PRPF40B-204ENST00000527253 DIRC3C9JPN6 131 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 SPINK4O60575 86 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 PET100P0DJ07 73 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 CCL18P55774 89 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 TCL1AP56279 114 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 RAB2AP61019 212 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 UBE2L3P68036 154 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 ESRGQ1W209 222 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 Q5BKY6 102 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 SSX7Q7RTT5 188 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 ZNF680Q8NEM1 530 aa7.23□□□□□ -1.25
PRPF40B-204ENST00000527253 IGHV1OR15-1A0A075B7D0 117 aa7.22□□□□□ -1.25
PRPF40B-204ENST00000527253 TRGV1A0A0A0MS02 117 aa7.22□□□□□ -1.25
PRPF40B-204ENST00000527253 RBAKDNA6NC62 111 aa7.22□□□□□ -1.25
PRPF40B-204ENST00000527253 TNP2Q05952 138 aa7.22□□□□□ -1.25
PRPF40B-204ENST00000527253 ZNF266Q14584 549 aa7.22□□□□□ -1.25
PRPF40B-204ENST00000527253 LYPD1Q8N2G4 141 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms