RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 OR2T35Q8NGX2 323 aa12.9□□□□□ -0.34
CAPN1-206ENST00000526966 SAT2Q96F10 170 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-206ENST00000526966 PYGO2Q9BRQ0 406 aa12.9□□□□□ -0.34
CAPN1-206ENST00000526966 NMES1Q9C002 83 aa12.9□□□□□ -0.34
CAPN1-206ENST00000526966 TMPRSS5Q9H3S3 457 aa12.9□□□□□ -0.34
CAPN1-206ENST00000526966 RCL1Q9Y2P8 373 aaKnown RBP12.9□□□□□ -0.34
CAPN1-206ENST00000526966 PXMP4Q9Y6I8 212 aa12.9□□□□□ -0.34
CAPN1-206ENST00000526966 DMBT1Q9UGM3 2413 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-206ENST00000526966 FAT1Q14517 4588 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 A0A096LPF7 62 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 HMSDA8MTL9 139 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 NPIPB6E9PJ23 425 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 H3BTX0 84 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 COX7A2P2O60397 106 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 MBPP02686 304 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-206ENST00000526966 CT45A10P0DMU9 189 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 LINC00315P59091 139 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 CYCSP99999 105 aaKnown RBP12.89□□□□□ -0.35
CAPN1-206ENST00000526966 OPCMLQ14982 345 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 Q6ZTI0 123 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 ZNF680Q8NEM1 530 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 VSIG2Q96IQ7 327 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 C18orf15Q96N68 181 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 MGST2Q99735 147 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 GGACTQ9BVM4 153 aa12.89□□□□□ -0.35
CAPN1-206ENST00000526966 TRAV12-3A0A0B4J271 114 aa12.88□□□□□ -0.35
CAPN1-206ENST00000526966 H3BQ15 152 aa12.88□□□□□ -0.35
CAPN1-206ENST00000526966 SMLR1H3BR10 107 aa12.88□□□□□ -0.35
CAPN1-206ENST00000526966 LEPP41159 167 aa12.88□□□□□ -0.35
CAPN1-206ENST00000526966 J3KRW8 73 aa12.87□□□□□ -0.35
CAPN1-206ENST00000526966 SCGB1D2O95969 90 aa12.87□□□□□ -0.35
CAPN1-206ENST00000526966 RAB14P61106 215 aa12.87□□□□□ -0.35
CAPN1-206ENST00000526966 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
CAPN1-206ENST00000526966 LGALSLQ3ZCW2 172 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-206ENST00000526966 C10orf113Q5VZT2 155 aa12.86□□□□□ -0.35
CAPN1-206ENST00000526966 C11orf72Q8NBR9 251 aa12.86□□□□□ -0.35
CAPN1-206ENST00000526966 MED9Q9NWA0 146 aa12.86□□□□□ -0.35
CAPN1-206ENST00000526966 RAB32Q13637 225 aa12.85□□□□□ -0.35
CAPN1-206ENST00000526966 GUK1Q16774 197 aa12.85□□□□□ -0.35
CAPN1-206ENST00000526966 EPM2AB3EWF7 344 aa12.84□□□□□ -0.35
CAPN1-206ENST00000526966 G3V3Q6 166 aa12.84□□□□□ -0.35
CAPN1-206ENST00000526966 ZNF253O75346 499 aa12.84□□□□□ -0.35
CAPN1-206ENST00000526966 SLC25A5P05141 298 aaKnown RBP12.84□□□□□ -0.35
CAPN1-206ENST00000526966 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
CAPN1-206ENST00000526966 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
CAPN1-206ENST00000526966 C11orf1Q9H5F2 150 aa12.84□□□□□ -0.35
CAPN1-206ENST00000526966 GSN-AS1Q9NRJ2 163 aa12.84□□□□□ -0.35
CAPN1-206ENST00000526966 LSM5Q9Y4Y9 91 aaKnown RBP12.84□□□□□ -0.35
CAPN1-206ENST00000526966 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
CAPN1-206ENST00000526966 C7orf71A4D174 169 aa12.83□□□□□ -0.36
CAPN1-206ENST00000526966 L7N2F9 121 aa12.83□□□□□ -0.36
CAPN1-206ENST00000526966 SIVA1O15304 175 aa12.83□□□□□ -0.36
CAPN1-206ENST00000526966 CAMLGP49069 296 aa12.83□□□□□ -0.36
CAPN1-206ENST00000526966 PPP1R1CQ8WVI7 109 aa12.83□□□□□ -0.36
CAPN1-206ENST00000526966 DNAJC4Q9NNZ3 241 aa12.83□□□□□ -0.36
CAPN1-206ENST00000526966 TRAV5A0A0B4J249 113 aa12.82□□□□□ -0.36
CAPN1-206ENST00000526966 KLLNB2CW77 178 aa12.82□□□□□ -0.36
CAPN1-206ENST00000526966 S100A10P60903 97 aa12.82□□□□□ -0.36
CAPN1-206ENST00000526966 ANXA2RQ3ZCQ2 193 aa12.82□□□□□ -0.36
CAPN1-206ENST00000526966 Q6ZRG5 221 aa12.82□□□□□ -0.36
CAPN1-206ENST00000526966 FAM19A4Q96LR4 140 aa12.82□□□□□ -0.36
CAPN1-206ENST00000526966 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
CAPN1-206ENST00000526966 FUT9Q9Y231 359 aa12.82□□□□□ -0.36
CAPN1-206ENST00000526966 VPS13BQ7Z7G8 4022 aa12.81□□□□□ -0.36
CAPN1-206ENST00000526966 ZNF324O75467 553 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-206ENST00000526966 MPC2O95563 127 aa12.81□□□□□ -0.36
CAPN1-206ENST00000526966 PVALBP20472 110 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-206ENST00000526966 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
CAPN1-206ENST00000526966 CDPF1Q6NVV7 123 aa12.81□□□□□ -0.36
CAPN1-206ENST00000526966 OR1L4Q8NGR5 311 aa12.81□□□□□ -0.36
CAPN1-206ENST00000526966 TRGV1A0A0A0MS02 117 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 H0YIZ8 118 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 M0R3E3 92 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 SPINK4O60575 86 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 NXPH4O95158 308 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 PET100P0DJ07 73 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 S100A11P31949 105 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 XGP55808 180 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 TCL1AP56279 114 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 VAMP2P63027 116 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 RAB31Q13636 194 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 LRRC37A5PQ49AS3 106 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 LYPD1Q8N2G4 141 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 EIF4E3Q8N5X7 224 aaKnown RBP12.8□□□□□ -0.36
CAPN1-206ENST00000526966 PFDN5Q99471 154 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 WDR83OSQ9Y284 106 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 ICOSQ9Y6W8 199 aa12.8□□□□□ -0.36
CAPN1-206ENST00000526966 TRBV19A0A075B6N1 114 aa12.79□□□□□ -0.36
CAPN1-206ENST00000526966 E5RGE8 158 aa12.79□□□□□ -0.36
CAPN1-206ENST00000526966 ERVFC1-1P60608 527 aa12.79□□□□□ -0.36
CAPN1-206ENST00000526966 ERCC8Q13216 396 aa12.79□□□□□ -0.36
CAPN1-206ENST00000526966 BTN1A1Q13410 526 aa12.79□□□□□ -0.36
CAPN1-206ENST00000526966 VWC2Q2TAL6 325 aa12.79□□□□□ -0.36
CAPN1-206ENST00000526966 IBA57Q5T440 356 aaKnown RBP12.79□□□□□ -0.36
CAPN1-206ENST00000526966 OR5AC2Q9NZP5 309 aa12.79□□□□□ -0.36
CAPN1-206ENST00000526966 KLF12Q9Y4X4 402 aa12.79□□□□□ -0.36
CAPN1-206ENST00000526966 MYCBP2O75592 4640 aa12.79□□□□□ -0.36
CAPN1-206ENST00000526966 NDUFB4O95168 129 aa12.78□□□□□ -0.36
CAPN1-206ENST00000526966 CRISP2P16562 243 aa12.78□□□□□ -0.36
CAPN1-206ENST00000526966 FUSP35637 526 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms