RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 OR10AG1Q8NH19 301 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 HIF1ANQ9NWT6 349 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 TRAV40A0A0B4J280 105 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 PRAC2D3DTV9 90 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 TSPOP30536 169 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 AMN1Q8IY45 258 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 RNF182Q8N6D2 247 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 SPTBN1Q01082 2364 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 HSBP1L1C9JCN9 74 aa12.71□□□□□ -0.37
CCDC90B-203ENST00000525503 TRGV3P03979 118 aa12.71□□□□□ -0.37
CCDC90B-203ENST00000525503 MRPL51Q4U2R6 128 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-203ENST00000525503 BRD3OSQ6XYD6 125 aa12.71□□□□□ -0.37
CCDC90B-203ENST00000525503 CHD8Q9HCK8 2581 aa12.71□□□□□ -0.38
CCDC90B-203ENST00000525503 LINC01559Q495D7 138 aa12.7□□□□□ -0.38
CCDC90B-203ENST00000525503 ZNF207O43670 478 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-203ENST00000525503 IGF1P05019 195 aa12.7□□□□□ -0.38
CCDC90B-203ENST00000525503 IFI27P40305 119 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-203ENST00000525503 HIST1H1AQ02539 215 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-203ENST00000525503 TMEM78Q5T7P6 136 aa12.7□□□□□ -0.38
CCDC90B-203ENST00000525503 C8orf86Q6ZUL3 223 aa12.7□□□□□ -0.38
CCDC90B-203ENST00000525503 CNFNQ9BYD5 112 aa12.7□□□□□ -0.38
CCDC90B-203ENST00000525503 SIGLEC8Q9NYZ4 499 aa12.7□□□□□ -0.38
CCDC90B-203ENST00000525503 WNK2Q9Y3S1 2297 aa12.69□□□□□ -0.38
CCDC90B-203ENST00000525503 IGHV3OR16-13A0A075B7E8 117 aa12.69□□□□□ -0.38
CCDC90B-203ENST00000525503 IGHV3-74A0A0B4J1X5 117 aa12.69□□□□□ -0.38
CCDC90B-203ENST00000525503 TRAV8-2A0A0B4J237 113 aa12.69□□□□□ -0.38
CCDC90B-203ENST00000525503 BRI3O95415 125 aa12.69□□□□□ -0.38
CCDC90B-203ENST00000525503 IL17RELQ6ZVW7 336 aa12.69□□□□□ -0.38
CCDC90B-203ENST00000525503 ZNF747Q9BV97 191 aa12.69□□□□□ -0.38
CCDC90B-203ENST00000525503 MUC21A0A0G2JKD1 596 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 MUC21A0A140T8X8 626 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 TMEM8BA6NDV4 472 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 H3BUA1 57 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 ZNF25P17030 456 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 CKS2P33552 79 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 ARL3P36405 182 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 ATP5J2P56134 94 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 MUC21Q5SSG8 566 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 LINC01545Q5VT33 79 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 AGPAT4-IT1Q9H0P7 198 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 ASH1LQ9NR48 2969 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 IGHV3-49A0A0A0MS15 119 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 LOC389332A0A1B0GUA5 103 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 G0S2P27469 103 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 ZNF575Q86XF7 245 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 LINC00527Q9UJ94 153 aa12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 TIMM8BQ9Y5J9 83 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-203ENST00000525503 PPBPP02775 128 aa12.67□□□□□ -0.38
CCDC90B-203ENST00000525503 IGHV4-38-2P0DP08 117 aa12.67□□□□□ -0.38
CCDC90B-203ENST00000525503 C9orf47Q6ZRZ4 202 aa12.67□□□□□ -0.38
CCDC90B-203ENST00000525503 USMG5Q96IX5 58 aa12.67□□□□□ -0.38
CCDC90B-203ENST00000525503 hDV102S1A0JD36 115 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 A6NDX4 124 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 PSMG3-AS1Q96PY0 264 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 MS4A6AQ9H2W1 248 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 PPP1R14DQ9NXH3 145 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 H0Y8G0 127 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 NDUFA4O00483 81 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 IGHG2P01859 326 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 MSMBP08118 114 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 C9orf139Q6ZV77 190 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
CCDC90B-203ENST00000525503 IGHV4-30-2A0A087WSY4 118 aa12.65□□□□□ -0.38
CCDC90B-203ENST00000525503 GAGE1Q13065 139 aa12.65□□□□□ -0.38
CCDC90B-203ENST00000525503 LY6EQ16553 131 aa12.65□□□□□ -0.38
CCDC90B-203ENST00000525503 H3BUX3 64 aa12.64□□□□□ -0.39
CCDC90B-203ENST00000525503 TMEM208Q9BTX3 173 aa12.64□□□□□ -0.39
CCDC90B-203ENST00000525503 NPYP01303 97 aa12.64□□□□□ -0.39
CCDC90B-203ENST00000525503 HBDP02042 147 aa12.64□□□□□ -0.39
CCDC90B-203ENST00000525503 PPIFP30405 207 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-203ENST00000525503 FAM106AQ4KMX7 169 aa12.64□□□□□ -0.39
CCDC90B-203ENST00000525503 SLC25A34Q6PIV7 304 aa12.64□□□□□ -0.39
CCDC90B-203ENST00000525503 STPG4Q8N801 248 aa12.64□□□□□ -0.39
CCDC90B-203ENST00000525503 LENEPQ9Y5L5 61 aa12.64□□□□□ -0.39
CCDC90B-203ENST00000525503 A0A096LNJ9 63 aa12.63□□□□□ -0.39
CCDC90B-203ENST00000525503 DLEU1O43261 78 aa12.63□□□□□ -0.39
CCDC90B-203ENST00000525503 TCF21O43680 179 aa12.63□□□□□ -0.39
CCDC90B-203ENST00000525503 TFPI2P48307 235 aa12.63□□□□□ -0.39
CCDC90B-203ENST00000525503 HINT1P49773 126 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-203ENST00000525503 LOXL1Q08397 574 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-203ENST00000525503 RNF185Q96GF1 192 aa12.63□□□□□ -0.39
CCDC90B-203ENST00000525503 MAP1LC3AQ9H492 121 aa12.63□□□□□ -0.39
CCDC90B-203ENST00000525503 PIEZO1Q92508 2521 aa12.63□□□□□ -0.39
CCDC90B-203ENST00000525503 IGKV3D-20A0A0C4DH25 116 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 SMKR1H3BMG3 65 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 DSCR9P59020 149 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 ZNF124Q15973 351 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 SPOCK3Q9BQ16 436 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 MSRB1Q9NZV6 116 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 MED13LQ71F56 2210 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 NCR2O95944 276 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 SMIM15Q7Z3B0 74 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 MCRIP2Q9BUT9 160 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 NPFFR1Q9GZQ6 430 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 SCRT2Q9NQ03 307 aa12.62□□□□□ -0.39
CCDC90B-203ENST00000525503 CSMD1Q96PZ7 3565 aa12.61□□□□□ -0.39
CCDC90B-203ENST00000525503 B4DSR2 109 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms