RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 CLLU1Q5K131 121 aa2.43□□□□□ -2.02
USP47-206ENST00000525367 SPACA4Q8TDM5 124 aa2.43□□□□□ -2.02
USP47-206ENST00000525367 SLC35B3Q9H1N7 401 aa2.43□□□□□ -2.02
USP47-206ENST00000525367 SOX21Q9Y651 276 aaPredicted RBP2.43□□□□□ -2.02
USP47-206ENST00000525367 PTPRGP23470 1445 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 C3orf85A0A1B0GTC6 90 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 C5orf67F2Z3F1 127 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 CD2P06729 351 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 CD14P08571 375 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 CXCL8P10145 99 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 PLGLB1Q02325 96 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 OTOSQ8NHW6 89 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 PSMF1Q92530 271 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 GNG8Q9UK08 70 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 MPC1Q9Y5U8 109 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 ZSWIM8A7E2V4 1837 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 TNS3Q68CZ2 1445 aa2.42□□□□□ -2.02
USP47-206ENST00000525367 SYNJ1O43426 1573 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 GLI3P10071 1580 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 KDM5CP41229 1560 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 COL1A1P02452 1464 aaPredicted RBP2.41□□□□□ -2.02
USP47-206ENST00000525367 TRBV20-1A0A075B6N2 111 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 IGHV1-24A0A0C4DH33 117 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 LOC107984156A0A0G2JMH3 177 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 BBIP1A8MTZ0 92 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 CD3DP04234 171 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 C1orf137Q5JT78 98 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 CASC2Q6XLA1 102 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 GKN2Q86XP6 184 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 ARL17AQ8IVW1 177 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 SMIM7Q9BQ49 75 aa2.41□□□□□ -2.02
USP47-206ENST00000525367 A0A0G2JMM0 328 aa2.4□□□□□ -2.03
USP47-206ENST00000525367 A0A1W2PPB8 328 aa2.4□□□□□ -2.03
USP47-206ENST00000525367 IFITM5A6NNB3 132 aa2.4□□□□□ -2.03
USP47-206ENST00000525367 KIR3DP1A8MWS1 328 aa2.4□□□□□ -2.03
USP47-206ENST00000525367 IGF2P01344 180 aa2.4□□□□□ -2.03
USP47-206ENST00000525367 PYYP10082 97 aa2.4□□□□□ -2.03
USP47-206ENST00000525367 MRPS10P82664 201 aaKnown RBP2.4□□□□□ -2.03
USP47-206ENST00000525367 SCIMPQ6UWF3 145 aa2.4□□□□□ -2.03
USP47-206ENST00000525367 FP248Q71RG6 208 aaPredicted RBP2.4□□□□□ -2.03
USP47-206ENST00000525367 CIB3Q96Q77 187 aaPredicted RBP2.4□□□□□ -2.03
USP47-206ENST00000525367 CHCHD2Q9Y6H1 151 aaPredicted RBP2.4□□□□□ -2.03
USP47-206ENST00000525367 DISP1Q96F81 1524 aa2.4□□□□□ -2.03
USP47-206ENST00000525367 NAIPQ13075 1403 aa2.4□□□□□ -2.03
USP47-206ENST00000525367 MYO5AQ9Y4I1 1855 aaKnown RBP2.39□□□□□ -2.03
USP47-206ENST00000525367 TMEM2Q9UHN6 1383 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 ADGRB3O60242 1522 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 C9orf170A2RU37 121 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 ZNF736B4DX44 427 aaPredicted RBP2.39□□□□□ -2.03
USP47-206ENST00000525367 EDF1O60869 148 aaKnown RBP2.39□□□□□ -2.03
USP47-206ENST00000525367 APODP05090 189 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 ZNF25P17030 456 aaPredicted RBP2.39□□□□□ -2.03
USP47-206ENST00000525367 BRD3OSQ6XYD6 125 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 ZNF833PQ6ZTB9 187 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 LINC00269Q8N2A0 174 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 KCNRGQ8N5I3 272 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 PSMG3Q9BT73 122 aaPredicted RBP2.39□□□□□ -2.03
USP47-206ENST00000525367 LSM2Q9Y333 95 aaKnown RBP2.39□□□□□ -2.03
USP47-206ENST00000525367 ARHGAP31Q2M1Z3 1444 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 GRIN2AQ12879 1464 aa2.39□□□□□ -2.03
USP47-206ENST00000525367 CCSMST1Q4G0I0 132 aa2.38□□□□□ -2.03
USP47-206ENST00000525367 TEX261Q6UWH6 196 aa2.38□□□□□ -2.03
USP47-206ENST00000525367 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
USP47-206ENST00000525367 COA5Q86WW8 74 aa2.38□□□□□ -2.03
USP47-206ENST00000525367 TCTEX1D1Q8N7M0 179 aa2.38□□□□□ -2.03
USP47-206ENST00000525367 SDF2Q99470 211 aa2.38□□□□□ -2.03
USP47-206ENST00000525367 NAA38Q9BRA0 125 aaKnown RBP2.38□□□□□ -2.03
USP47-206ENST00000525367 TCEAL7Q9BRU2 100 aa2.38□□□□□ -2.03
USP47-206ENST00000525367 CCDC88CQ9P219 2028 aa2.38□□□□□ -2.03
USP47-206ENST00000525367 PTPRBP23467 1997 aa2.38□□□□□ -2.03
USP47-206ENST00000525367 J3QRE1 110 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 M0R129 80 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 M0R2P5 195 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 HYPMO75409 117 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 FGF7P21781 194 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 CNBPP62633 177 aaKnown RBP2.37□□□□□ -2.03
USP47-206ENST00000525367 LINC01545Q5VT33 79 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 FOXI2Q6ZQN5 318 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 OR10AG1Q8NH19 301 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 Q8TAT8 98 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 COPS9Q8WXC6 57 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 SDK2Q58EX2 2172 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 COL4A2P08572 1712 aa2.37□□□□□ -2.03
USP47-206ENST00000525367 RGS12O14924 1447 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 TRBV6-8A0A0A6YYG3 113 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 F6UZH7 168 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 MIR22HGQ0VDD5 57 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 FAM74A1Q5RGS3 127 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 ATP11AUNQ6ZP68 121 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 FAM19A2Q8N3H0 131 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.36□□□□□ -2.03
USP47-206ENST00000525367 ATP6V0E2Q8NHE4 81 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 PDCD10Q9BUL8 212 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 RERGLQ9H628 205 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 ORMDL1Q9P0S3 153 aa2.36□□□□□ -2.03
USP47-206ENST00000525367 ANAPC1Q9H1A4 1944 aa2.35□□□□□ -2.03
USP47-206ENST00000525367 F8W1H4 67 aa2.35□□□□□ -2.03
USP47-206ENST00000525367 OCIAD2Q56VL3 154 aa2.35□□□□□ -2.03
USP47-206ENST00000525367 MEIG1Q5JSS6 88 aa2.35□□□□□ -2.03
USP47-206ENST00000525367 C10orf55Q5SWW7 151 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms