RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 NUP35Q8NFH5 326 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 OR11H1Q8NG94 326 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 NEU1Q99519 415 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 TACC2O95359 2948 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 C2orf70A6NJV1 201 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 ZNF705FA8MVS1 300 aaPredicted RBP7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST1H2BKO60814 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 SH2D1AO60880 128 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST1H2BJP06899 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST1H2BOP23527 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HLA-DMBP28068 263 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST1H2BBP33778 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST1H2BDP58876 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 SNRPEP62304 92 aaKnown RBP7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST1H2BCP62807 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HBBP68871 147 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST2H2BEQ16778 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.58□□□□□ -1.2
VPS13B-212ENST00000524330 MRPL54Q6P161 138 aaKnown RBP7.58□□□□□ -1.2
VPS13B-212ENST00000524330 EBLN2Q6P2I7 272 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST1H2BHQ93079 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST1H2BNQ99877 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 HIST1H2BMQ99879 126 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 VGLL1Q99990 258 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 MRPL18Q9H0U6 180 aaKnown RBP7.58□□□□□ -1.2
VPS13B-212ENST00000524330 ESM1Q9NQ30 184 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 APCP25054 2843 aa7.58□□□□□ -1.2
VPS13B-212ENST00000524330 A0A1B0GUT8 65 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 C5orf52A6NGY3 159 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 UBE2CO00762 179 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 SOCS3O14543 225 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 APCSP02743 223 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 ORM1P02763 201 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 AKR1D1P51857 326 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 FOXA3P55318 350 aaPredicted RBP7.57□□□□□ -1.2
VPS13B-212ENST00000524330 CMC4P56277 68 aaPredicted RBP7.57□□□□□ -1.2
VPS13B-212ENST00000524330 TCTEX1D4Q5JR98 221 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 OR8A1Q8NGG7 326 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 OR9G4Q8NGQ1 327 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 C8orf49Q96NF6 230 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 AGPAT4-IT1Q9H0P7 198 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 RNF114Q9Y508 228 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
VPS13B-212ENST00000524330 IGKV3-7A0A075B6H7 116 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 TRAV25A0A0B4J276 109 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 TRAV21A0A0B4J279 112 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 F2Z2F3 143 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 HAX1O00165 279 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 SPINK4O60575 86 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 CA1P00915 261 aaPredicted RBP7.56□□□□□ -1.2
VPS13B-212ENST00000524330 HOXA5P20719 270 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 TSPOP30536 169 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 LEPP41159 167 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 ERCC8Q13216 396 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 WFDC3Q8IUB2 231 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 LINC01006Q8NI28 216 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 Q8TAT8 98 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 PGLYRP4Q96LB8 373 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 ODF3Q96PU9 254 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 MS4A6AQ9H2W1 248 aa7.56□□□□□ -1.2
VPS13B-212ENST00000524330 HELZ2Q9BYK8 2649 aaKnown RBP7.56□□□□□ -1.2
VPS13B-212ENST00000524330 TENM4Q6N022 2769 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 PRAC2D3DTV9 90 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 K7EQG2 157 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 CCL24O00175 119 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 CRISP2P16562 243 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 SLURP1P55000 103 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 LINC01559Q495D7 138 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 LINC00322Q6ZN03 302 aaPredicted RBP7.55□□□□□ -1.2
VPS13B-212ENST00000524330 TMEM136Q6ZRR5 245 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 SMIM15Q7Z3B0 74 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 CELSR2Q9HCU4 2923 aa7.55□□□□□ -1.2
VPS13B-212ENST00000524330 OR4C46A6NHA9 309 aa7.54□□□□□ -1.2
VPS13B-212ENST00000524330 GPX1P07203 203 aa7.54□□□□□ -1.2
VPS13B-212ENST00000524330 CAMPP49913 170 aa7.54□□□□□ -1.2
VPS13B-212ENST00000524330 OR10J3Q5JRS4 329 aa7.54□□□□□ -1.2
VPS13B-212ENST00000524330 COA6Q5JTJ3 125 aaKnown RBP7.54□□□□□ -1.2
VPS13B-212ENST00000524330 FER1L6-AS1Q8NA97 138 aa7.54□□□□□ -1.2
VPS13B-212ENST00000524330 DCANP1Q8TF63 244 aa7.54□□□□□ -1.2
VPS13B-212ENST00000524330 C20orf173Q96LM9 149 aa7.54□□□□□ -1.2
VPS13B-212ENST00000524330 CENPEQ02224 2701 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 ITPR3Q14573 2671 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 A0A1B0GXF2 115 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 CRLF1O75462 422 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 CD28P10747 220 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 TFPI2P48307 235 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 CRIP1P50238 77 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 CACNG7P62955 275 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 DEFB136Q30KP8 78 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 PSMG4Q5JS54 123 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 FOXI2Q6ZQN5 318 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 BAGE3Q86Y29 109 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 NDUFA11Q86Y39 141 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 TMEM18Q96B42 140 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 KCNS1Q96KK3 526 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 SPAG8Q99932 426 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-212ENST00000524330 SMR3AQ99954 134 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 TPPP3Q9BW30 176 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 SIGLEC8Q9NYZ4 499 aa7.53□□□□□ -1.2
VPS13B-212ENST00000524330 CCDC168Q8NDH2 2452 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms