RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	PPIAL4D	F5H284	164 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033		I3L2K1	104 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	PLXNB1	O43157	2135 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	PAX4	O43316	350 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	LEPROTL1	O95214	131 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	IGHV3-48	P01763	117 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	PPIAL4F	P0DN26	164 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	FGF6	P10767	208 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	CD24	P25063	80 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	PCP4	P48539	62 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	CCL8	P80075	99 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	HIST1H1A	Q02539	215 aa	Predicted RBP	6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	MPV17L2	Q567V2	206 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	MALRD1	Q5VYJ5	2156 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	BLNK	Q8WV28	456 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	TNFRSF14	Q92956	283 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	SRSF8	Q9BRL6	282 aa	Known RBP	6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	PLCE1	Q9P212	2302 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	HSPB8	Q9UJY1	196 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	HIGD1A	Q9Y241	93 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	SIGLEC9	Q9Y336	463 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033		U3KQK5	164 aa		6.12	□□□□□ -1.43
SPIDR-223	ENST00000524033	MEGF8	Q7Z7M0	2845 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033		A0A096LNJ9	63 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	IGLV1-47	P01700	117 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	IGHV1-8	P0DP01	117 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	COX8A	P10176	69 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	ORM2	P19652	201 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	PRR31	Q5SQ13	230 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	SAPCD1	Q5SSQ6	148 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	C12orf54	Q6X4T0	127 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	SIGLEC15	Q6ZMC9	328 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	ZNF493	Q6ZR52	646 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	COX8C	Q7Z4L0	72 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	LYPD1	Q8N2G4	141 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	C16orf92	Q96LL3	132 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	SGK494	Q96LW2	274 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	ZNF747	Q9BV97	191 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	HIF1AN	Q9NWT6	349 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	RPH3AL	Q9UNE2	315 aa		6.11	□□□□□ -1.43
SPIDR-223	ENST00000524033	TRBV19	A0A075B6N1	114 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	MUC21	A0A0G2JKD1	596 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	MUC21	A0A140T8X8	626 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033		A0A1B0GUT8	65 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	CHEK1	O14757	476 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	NDUFB3	O43676	98 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	IGKV1-17	P01599	117 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	MSMB	P08118	114 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	ARMS2	P0C7Q2	107 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	CNTFR	P26992	372 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	LMO4	P61968	165 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	PAX8	Q06710	450 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	RIG	Q13278	110 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	MUC21	Q5SSG8	566 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033		Q6AWC8	147 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	HCP5	Q6MZN7	132 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	DAZAP1	Q96EP5	407 aa	Known RBP	6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	ZC2HC1A	Q96GY0	325 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	SHANK2-AS3	Q9BTD1	123 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	MAP1LC3C	Q9BXW4	147 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	NPFFR1	Q9GZQ6	430 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	TMEM133	Q9H2Q1	129 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	ABCA1	O95477	2261 aa		6.1	□□□□□ -1.43
SPIDR-223	ENST00000524033	TRAV8-1	A0A0A6YYK1	113 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	IGHV1-3	A0A0C4DH29	117 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	WI2-2373I1.2	A0A1W2PRP0	233 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	OR2T8	A6NH00	312 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	LY6L	H3BQJ8	138 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033		H3BTX0	84 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033		K7EIM0	57 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	NCR2	O95944	276 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	NUDT3	O95989	172 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	RBP4	P02753	201 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	PSG1	P11464	419 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	CRIP1	P50238	77 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	LYZ	P61626	148 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	ARF6	P62330	175 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	SCGB2A2	Q13296	93 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	FOXE3	Q13461	319 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	LGALS9B	Q3B8N2	356 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	LGALS9C	Q6DKI2	356 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	GOLT1A	Q6ZVE7	132 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	LHFPL4	Q7Z7J7	247 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	OR4C5	Q8NGB2	326 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	CCL17	Q92583	94 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	RNF5	Q99942	180 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	PSG8	Q9UQ74	426 aa		6.09	□□□□□ -1.43
SPIDR-223	ENST00000524033	IGHV3-72	A0A0B4J1Y9	119 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	TRAV8-6	A0A0B4J262	113 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	LINC01546	A6NGU7	62 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	HSBP1L1	C9JCN9	74 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	GPR183	P32249	361 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	SEC11A	P67812	179 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	PSG9	Q00887	426 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	PSG3	Q16557	428 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	UFSP1	Q6NVU6	142 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	PRNT	Q86SH4	94 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	EXOC3-AS1	Q8N2X6	119 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms