RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 PCBD1P61457 104 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 RICTORQ6R327 1708 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 TMEM136Q6ZRR5 245 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 SH2D6Q7Z4S9 175 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 SPATA12Q7Z6I5 190 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 TMEM61Q8N0U2 210 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 CEND1Q8N111 149 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 TMEM252Q8N6L7 170 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 CSNK1G2-AS1Q8NCQ2 148 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 OR8B3Q8NGG8 313 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 LINC01600Q96MT4 127 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 ZNF714Q96N38 554 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 RGPD5Q99666 1765 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 CCL28Q9NRJ3 127 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 DPM3Q9P2X0 92 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 ARFGEF2Q9Y6D5 1785 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 LY96Q9Y6Y9 160 aa4.08□□□□□ -1.76
EFCAB13-213ENST00000523978 FXYD6-FXYD2A0A087WZ82 144 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 TRAV1-1A0A0B4J248 108 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 C16orf97H3BN30 126 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 K7EM74 188 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 IGHV3-48P01763 117 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 RPL30P62888 115 aaKnown RBP4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 RSPO1Q2MKA7 263 aaPredicted RBP4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 MPV17LQ2QL34 196 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 C19orf48Q6RUI8 117 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 RNASE6Q93091 150 aaKnown RBP4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 TRGV9Q99603 122 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 UPK3BQ9BT76 320 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 FXYD6Q9H0Q3 95 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 LINC00597Q9H2U6 94 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 CYTL1Q9NRR1 136 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 TAS2R4Q9NYW5 299 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 DOCK2Q92608 1830 aa4.07□□□□□ -1.76
EFCAB13-213ENST00000523978 MCM3APO60318 1980 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 IGKV6D-21A0A0A0MT36 114 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 TRAV2A0A0B4J234 112 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 TRAV17A0A0B4J275 112 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 A0A0G2JND7 137 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 MDFIC2A0A1B0GVS7 189 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 SMIM13P0DJ93 91 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 COX7A1P24310 79 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 FUSP35637 526 aaKnown RBP eCLIP4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 KRTDAPP60985 99 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 HIST1H4AP62805 103 aaKnown RBP4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 C14orf177Q52M58 125 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 CFAP126Q5VTH2 177 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 DEFB107AQ8IZN7 70 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 ZNF645Q8N7E2 425 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 Q8N8P6 123 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 GFRA4Q9GZZ7 299 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 OSTCQ9NRP0 149 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 DOCK1Q14185 1865 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 BTAF1O14981 1849 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 MYOM1P52179 1685 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 MAST1Q9Y2H9 1570 aa4.06□□□□□ -1.76
EFCAB13-213ENST00000523978 ASXL1Q8IXJ9 1541 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 A0A087X002 238 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 FAM72CH0Y354 149 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 CHTF8P0CG12 524 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 ZNF32P17041 273 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 SNRPFP62306 86 aaKnown RBP4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 BLCAPP62952 87 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 SS18Q15532 418 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 ASB16-AS1Q495Z4 193 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 FAM72AQ5TYM5 149 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 LAIR2Q6ISS4 152 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 FAM72DQ6L9T8 149 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 FAM53AQ6NSI3 398 aaPredicted RBP4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 ATP11AUNQ6ZP68 121 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 Q6ZQT7 251 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 AQP3Q92482 292 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 SPTSSAQ969W0 71 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 Q9H3A6 140 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 POLEQ07864 2286 aa4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 PDCD11Q14690 1871 aaKnown RBP4.05□□□□□ -1.76
EFCAB13-213ENST00000523978 EP400Q96L91 3159 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 KIAA1210Q9ULL0 1709 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 IGHV3OR15-7A0A075B7D8 119 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 IGKV6-21A0A0C4DH24 114 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 A0A1W2PS18 150 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 E7EQL1 145 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 SAA1P0DJI8 122 aaPredicted RBP4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 CD28P10747 220 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 LINC01547P58512 204 aaPredicted RBP4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 CIRBPQ14011 172 aaKnown RBP4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 PRR4Q16378 134 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 PSMG4Q5JS54 123 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 FAM216BQ8N7L0 139 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 ITLN1Q8WWA0 313 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 ITLN2Q8WWU7 325 aaPredicted RBP4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 MICAL3Q7RTP6 2002 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 HEATR5AQ86XA9 2040 aa4.04□□□□□ -1.76
EFCAB13-213ENST00000523978 EML6Q6ZMW3 1958 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 COL16A1Q07092 1604 aaPredicted RBP4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 IGKV1-12A0A0C4DH73 117 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 IBA57-AS1B1ANH7 110 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms