RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 OR2H2O95918 312 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 HAND1O96004 215 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 IFNA21P01568 189 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 PMP2P02689 132 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 CTSDP07339 412 aaPredicted RBP1.86□□□□□ -2.11
SKP1-212ENST00000523966 OR4A8P0C604 315 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 OR4E1P0C645 316 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 PET100P0DJ07 73 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 ZNF728P0DKX0 622 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 SULT1A3P0DMM9 295 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 SULT1A4P0DMN0 295 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 LGALS3P17931 250 aaKnown RBP1.86□□□□□ -2.11
SKP1-212ENST00000523966 MP68P56378 58 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 ERVS71-1P61550 626 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 SNRPD2P62316 118 aaKnown RBP1.86□□□□□ -2.11
SKP1-212ENST00000523966 RAB31Q13636 194 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 COTL1Q14019 142 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 MMDQ15546 238 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 MSMO1Q15800 293 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 NCMAPQ5T1S8 102 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 FAM162BQ5T6X4 162 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 SSX7Q7RTT5 188 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 TCF24Q7RTU0 167 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 SLC36A1Q7Z2H8 476 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 LYG2Q86SG7 212 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 LHFPL1Q86WI0 220 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 C12orf45Q8N5I9 185 aaPredicted RBP1.86□□□□□ -2.11
SKP1-212ENST00000523966 TCTEX1D1Q8N7M0 179 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 OR13C8Q8NGS7 320 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 OR2T35Q8NGX2 323 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 OR10J5Q8NHC4 309 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 GRPEL2Q8TAA5 225 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 GALMQ96C23 342 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 ARL6Q9H0F7 186 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 DYNLRB1Q9NP97 96 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 CACFD1Q9UGQ2 172 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 TRAPPC2LQ9UL33 140 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 PAIP2BQ9ULR5 123 aaKnown RBP1.86□□□□□ -2.11
SKP1-212ENST00000523966 RBM7Q9Y580 266 aaKnown RBP1.86□□□□□ -2.11
SKP1-212ENST00000523966 FRYQ5TBA9 3013 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 LRRK2Q5S007 2527 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 ATMQ13315 3056 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 DSCAMO60469 2012 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 TNCP24821 2201 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 DYSFO75923 2080 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 PTPN13Q12923 2485 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 CSPG4Q6UVK1 2322 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 YLPM1P49750 1951 aaKnown RBP1.85□□□□□ -2.11
SKP1-212ENST00000523966 USP9YO00507 2555 aaPredicted RBP1.85□□□□□ -2.11
SKP1-212ENST00000523966 CREBBPQ92793 2442 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 IGLV10-54A0A075B6I4 117 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 TRGV10A0A0A0MS01 117 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 TRBV6-7A0A0A0MS04 114 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 A0A0D9SG52 128 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 DUXBA0A1W2PPF3 345 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 hADV38S2A0JD32 116 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 ODAMA1E959 279 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 CRYM-AS1A6NIL9 109 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 HMSDA8MTL9 139 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 GPR31O00270 319 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 SDCBPO00560 298 aaPredicted RBP1.85□□□□□ -2.11
SKP1-212ENST00000523966 ITGB1BP1O14713 200 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 FGF16O43320 207 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 ZNF737O75373 536 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 NDUFS6O75380 124 aaKnown RBP1.85□□□□□ -2.11
SKP1-212ENST00000523966 BRI3O95415 125 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 PPYP01298 95 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 CTSGP08311 255 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 CXCL3P19876 107 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 NFYAP23511 347 aaPredicted RBP1.85□□□□□ -2.11
SKP1-212ENST00000523966 GABRA2P47869 451 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 PIGPP57054 158 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 RAB2AP61019 212 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 EIF5AP63241 154 aaKnown RBP1.85□□□□□ -2.11
SKP1-212ENST00000523966 HLA-DRB3P79483 266 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 CCL8P80075 99 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 TNFRSF9Q07011 255 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 PPP1R1AQ13522 171 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 SMCO1Q147U7 214 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 HMGN3Q15651 99 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 NDUFA5Q16718 116 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 TMEM249Q2WGJ8 235 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 OR10J3Q5JRS4 329 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 AADACL3Q5VUY0 350 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 TEX36Q5VZQ5 186 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 ZNF826PQ6ZT77 177 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 MUC15Q8N387 334 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 OR4A5Q8NH83 315 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 ANGPTL6Q8NI99 470 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 MRPL30Q8TCC3 161 aaKnown RBP1.85□□□□□ -2.11
SKP1-212ENST00000523966 ABHD14BQ96IU4 210 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 PDCD10Q9BUL8 212 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 NMES1Q9C002 83 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 OR2D2Q9H210 308 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 FBXL15Q9H469 300 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 TAF9BQ9HBM6 251 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 SLC2A9Q9NRM0 540 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 CBLN4Q9NTU7 201 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 TMEM106BQ9NUM4 274 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 MRPL16Q9NX20 251 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms