RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 RBMY1A1P0DJD3 496 aaKnown RBP11.03□□□□□ -0.64
SYNPO-205ENST00000522122 RBMY1CP0DJD4 496 aa11.03□□□□□ -0.64
SYNPO-205ENST00000522122 THAP8Q8NA92 274 aa11.03□□□□□ -0.64
SYNPO-205ENST00000522122 FAM110DQ8TAY7 271 aaPredicted RBP11.03□□□□□ -0.64
SYNPO-205ENST00000522122 C8orf49Q96NF6 230 aa11.02□□□□□ -0.64
SYNPO-205ENST00000522122 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.64
SYNPO-205ENST00000522122 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.64
SYNPO-205ENST00000522122 FXYD5Q96DB9 178 aa11.02□□□□□ -0.65
SYNPO-205ENST00000522122 FAM215AQ9Y5M1 114 aa11.02□□□□□ -0.65
SYNPO-205ENST00000522122 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.02□□□□□ -0.65
SYNPO-205ENST00000522122 TRGV4A0A0C4DH28 118 aa11.02□□□□□ -0.65
SYNPO-205ENST00000522122 PRR30Q53SZ7 412 aaPredicted RBP11.02□□□□□ -0.65
SYNPO-205ENST00000522122 PLA2G2CQ5R387 149 aa11.02□□□□□ -0.65
SYNPO-205ENST00000522122 ZFHX2Q9C0A1 2572 aaPredicted RBP11.02□□□□□ -0.65
SYNPO-205ENST00000522122 ATP6V0E1O15342 81 aa11.02□□□□□ -0.65
SYNPO-205ENST00000522122 UBE2E1P51965 193 aa11.02□□□□□ -0.65
SYNPO-205ENST00000522122 SPG11Q96JI7 2443 aa11.02□□□□□ -0.65
SYNPO-205ENST00000522122 IGLL1P15814 213 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 DIAPH2-AS1Q14236 149 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 C11orf44Q8N8P7 122 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 PRR25Q96S07 402 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 DAZ1Q9NQZ3 744 aaKnown RBP11.01□□□□□ -0.65
SYNPO-205ENST00000522122 PCNX3Q9H6A9 2034 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 PTPRQQ9UMZ3 2332 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 OVOL3O00110 214 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 TMEM95Q3KNT9 176 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 CFAP161Q6P656 301 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 IGF2BP2-AS1Q96M15 143 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 SPOCK3Q9BQ16 436 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 MORN3Q6PF18 240 aaPredicted RBP11.01□□□□□ -0.65
SYNPO-205ENST00000522122 M0R2P5 195 aa11.01□□□□□ -0.65
SYNPO-205ENST00000522122 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
SYNPO-205ENST00000522122 IGHV3-73A0A0B4J1V6 119 aa11□□□□□ -0.65
SYNPO-205ENST00000522122 IGHV1-24A0A0C4DH33 117 aa11□□□□□ -0.65
SYNPO-205ENST00000522122 H3BRN7 92 aa11□□□□□ -0.65
SYNPO-205ENST00000522122 ADARB2-AS1A8MUL3 147 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 EIF4EBP1Q13541 118 aaPredicted RBP10.99□□□□□ -0.65
SYNPO-205ENST00000522122 MRPL51Q4U2R6 128 aaKnown RBP10.99□□□□□ -0.65
SYNPO-205ENST00000522122 DLX4Q92988 240 aaPredicted RBP10.99□□□□□ -0.65
SYNPO-205ENST00000522122 A0A087WWL8 130 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 GNLYP22749 145 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 IL17RELQ6ZVW7 336 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 KAAG1Q9UBP8 84 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 CHCHD5Q9BSY4 110 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 FAM208BQ5VWN6 2430 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 G3V318 75 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 K7ENP7 123 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 HTN3P15516 51 aa10.99□□□□□ -0.65
SYNPO-205ENST00000522122 ZNF415Q09FC8 603 aa10.98□□□□□ -0.65
SYNPO-205ENST00000522122 PGPEP1Q9NXJ5 209 aa10.98□□□□□ -0.65
SYNPO-205ENST00000522122 KMT2EQ8IZD2 1858 aa10.98□□□□□ -0.65
SYNPO-205ENST00000522122 RPL36AP83881 106 aaKnown RBP10.98□□□□□ -0.65
SYNPO-205ENST00000522122 PRSS57Q6UWY2 283 aa10.98□□□□□ -0.65
SYNPO-205ENST00000522122 RPL36ALQ969Q0 106 aaKnown RBP10.98□□□□□ -0.65
SYNPO-205ENST00000522122 K7EM74 188 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 Q8N8P6 123 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 EML6Q6ZMW3 1958 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 SSBP2P81877 361 aaPredicted RBP10.97□□□□□ -0.65
SYNPO-205ENST00000522122 ASPHD1Q5U4P2 390 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 ZC2HC1AQ96GY0 325 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 LTAP01374 205 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 PCDH15Q96QU1 1955 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 LHBP01229 141 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 TDRG1Q3Y452 100 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 C2orf66Q6UXQ4 117 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 COL4A2P08572 1712 aa10.97□□□□□ -0.65
SYNPO-205ENST00000522122 TRAV8-4A0A0B4J246 113 aa10.96□□□□□ -0.65
SYNPO-205ENST00000522122 DAZAP2Q15038 168 aaPredicted RBP10.96□□□□□ -0.65
SYNPO-205ENST00000522122 LGALS9BQ3B8N2 356 aa10.96□□□□□ -0.65
SYNPO-205ENST00000522122 LGALS9CQ6DKI2 356 aa10.96□□□□□ -0.65
SYNPO-205ENST00000522122 SIGLEC8Q9NYZ4 499 aa10.96□□□□□ -0.65
SYNPO-205ENST00000522122 BRWD1-AS2P59051 145 aa10.96□□□□□ -0.66
SYNPO-205ENST00000522122 IGLC7A0M8Q6 106 aa10.96□□□□□ -0.66
SYNPO-205ENST00000522122 COX8AP10176 69 aa10.96□□□□□ -0.66
SYNPO-205ENST00000522122 MALP21145 153 aa10.96□□□□□ -0.66
SYNPO-205ENST00000522122 ZNF491Q8N8L2 437 aa10.96□□□□□ -0.66
SYNPO-205ENST00000522122 ATG2AQ2TAZ0 1938 aa10.96□□□□□ -0.66
SYNPO-205ENST00000522122 ACACBO00763 2458 aa10.96□□□□□ -0.66
SYNPO-205ENST00000522122 CMC4P56277 68 aaPredicted RBP10.95□□□□□ -0.66
SYNPO-205ENST00000522122 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 ANAPC13Q9BS18 74 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 MSRB2Q9Y3D2 182 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 TRGV1A0A0A0MS02 117 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 EML5Q05BV3 1969 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 LINC00158P58513 81 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 NPC2P61916 151 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 C8orf86Q6ZUL3 223 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 RUSC1-AS1Q66K80 236 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 TMEM86BQ8N661 226 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 C8orf31Q8N9H6 132 aa10.95□□□□□ -0.66
SYNPO-205ENST00000522122 SYNJ2BPP57105 145 aa10.94□□□□□ -0.66
SYNPO-205ENST00000522122 LY6G5BQ8NDX9 201 aa10.94□□□□□ -0.66
SYNPO-205ENST00000522122 CST9LQ9H4G1 147 aa10.94□□□□□ -0.66
SYNPO-205ENST00000522122 PLA2G5P39877 138 aa10.94□□□□□ -0.66
SYNPO-205ENST00000522122 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
SYNPO-205ENST00000522122 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
SYNPO-205ENST00000522122 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
SYNPO-205ENST00000522122 ATRXP46100 2492 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms