RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 MAP1LC3AQ9H492 121 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 LOC102724200A0A096LPH7 203 aaPredicted RBP7.93□□□□□ -1.14
MCF2-209ENST00000520602 FAM181BA6NEQ2 426 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 OVOL3O00110 214 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 RNASE4P34096 147 aaKnown RBP7.93□□□□□ -1.14
MCF2-209ENST00000520602 GTSF1Q8WW33 167 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 SNAI2O43623 268 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 RNF224P0DH78 156 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 EVI2AP22794 236 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 MIEN1Q9BRT3 115 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 KLK15Q9H2R5 256 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 KLF12Q9Y4X4 402 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 CT83Q5H943 113 aa7.93□□□□□ -1.14
MCF2-209ENST00000520602 C10orf105Q8TEF2 133 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 A0A1B0GW15 77 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 FCER1GP30273 86 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 TDRG1Q3Y452 100 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 IL17RELQ6ZVW7 336 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 ZNF502Q8TBZ5 544 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 GFRA4Q9GZZ7 299 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 WI2-2373I1.2A0A1W2PRP0 233 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 TMEM8BA6NDV4 472 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 FBLL1A6NHQ2 334 aaKnown RBP7.92□□□□□ -1.14
MCF2-209ENST00000520602 RPLP1P05386 114 aaKnown RBP7.92□□□□□ -1.14
MCF2-209ENST00000520602 IGLC2P0DOY2 106 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 MRGPRG-AS1Q2M3A8 158 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 TMEM95Q3KNT9 176 aa7.92□□□□□ -1.14
MCF2-209ENST00000520602 VAMP3Q15836 100 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 RHPN1-AS1Q9BWJ2 59 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 H3BVH4 76 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 NMUP48645 174 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 EBLN2Q6P2I7 272 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 C8orf86Q6ZUL3 223 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 ABCA2Q9BZC7 2435 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 FAM223BA6NKX1 122 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 DSCR9P59020 149 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 FAM223AQ8IWN6 122 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 C5orf56Q8N8D9 126 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 C11orf44Q8N8P7 122 aa7.91□□□□□ -1.14
MCF2-209ENST00000520602 ZMAT5Q9UDW3 170 aaKnown RBP7.91□□□□□ -1.14
MCF2-209ENST00000520602 FAM231BA6NCW3 169 aa7.9□□□□□ -1.14
MCF2-209ENST00000520602 LINC01356Q8N9X3 169 aa7.9□□□□□ -1.14
MCF2-209ENST00000520602 IFI27P40305 119 aaPredicted RBP7.9□□□□□ -1.14
MCF2-209ENST00000520602 CHCHD1Q96BP2 118 aaKnown RBP7.9□□□□□ -1.14
MCF2-209ENST00000520602 BEX4Q9NWD9 120 aaPredicted RBP7.9□□□□□ -1.14
MCF2-209ENST00000520602 DOPEY1Q5JWR5 2465 aa7.9□□□□□ -1.15
MCF2-209ENST00000520602 EGR2P11161 476 aaPredicted RBP7.9□□□□□ -1.15
MCF2-209ENST00000520602 DNLZQ5SXM8 178 aa7.9□□□□□ -1.15
MCF2-209ENST00000520602 COL5A1-AS1Q5SY13 56 aa7.9□□□□□ -1.15
MCF2-209ENST00000520602 FAM74A4Q5TZK3 123 aa7.9□□□□□ -1.15
MCF2-209ENST00000520602 GDF5OSQ5U4N7 250 aa7.9□□□□□ -1.15
MCF2-209ENST00000520602 FAM159AQ6UWV7 190 aa7.9□□□□□ -1.15
MCF2-209ENST00000520602 USMG5Q96IX5 58 aa7.9□□□□□ -1.15
MCF2-209ENST00000520602 TRAV9-2A0A087WT02 112 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 PRAC2D3DTV9 90 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 HAX1O00165 279 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 BUB3O43684 328 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 IGHV4-59P01825 116 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 ZNF688P0C7X2 276 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 MYOZ3Q8TDC0 251 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 DYNLRB2Q8TF09 96 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 PRSS22Q9GZN4 317 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 SLC25A16P16260 332 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 MYCNOSP40205 109 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 SLC25A34Q6PIV7 304 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 hDV102S1A0JD36 115 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 EREGO14944 169 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 TMEM208Q9BTX3 173 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 MLST8Q9BVC4 326 aa7.89□□□□□ -1.15
MCF2-209ENST00000520602 ASIPP42127 132 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 SNRPD3P62318 126 aaKnown RBP7.88□□□□□ -1.15
MCF2-209ENST00000520602 DEFB112Q30KQ8 113 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 LBHQ53QV2 105 aaPredicted RBP7.88□□□□□ -1.15
MCF2-209ENST00000520602 C9orf139Q6ZV77 190 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 WIPF2Q8TF74 440 aaPredicted RBP7.88□□□□□ -1.15
MCF2-209ENST00000520602 DEFB104AQ8WTQ1 72 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 AGPAT4-IT1Q9H0P7 198 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 CBY3A6NI87 242 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 NUDT3O95989 172 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 TP53TG3Q9ULZ0 132 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 GOLT1BQ9Y3E0 138 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 LAMA5O15230 3695 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 C19orf71A6NCJ1 209 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 PSMG4Q5JS54 123 aa7.88□□□□□ -1.15
MCF2-209ENST00000520602 SPRY2O43597 315 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 TRBV12-3P01733 135 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 LEPP41159 167 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 DEFB1P60022 68 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 EBI3Q14213 229 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 MAJINQ3KP22 176 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 MBD6Q96DN6 1003 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 PEF1Q9UBV8 284 aaKnown RBP7.87□□□□□ -1.15
MCF2-209ENST00000520602 TRAV21A0A0B4J279 112 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 F6UB75 175 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 SYS1-DBNDD2H3BUS1 97 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 IGHV1-24A0A0C4DH33 117 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 SYNJ2BPP57105 145 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 CACNG7P62955 275 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 FAM104BQ5XKR9 115 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 PRSS57Q6UWY2 283 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms