RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 SHANK3Q9BYB0 1731 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 LAMC3Q9Y6N6 1575 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 DSCAML1Q8TD84 2053 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 HELZP42694 1942 aaKnown RBP1.86□□□□□ -2.11
PABPC1-211ENST00000519596 KIDINS220Q9ULH0 1771 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 IGHV3-43A0A0B4J1X8 118 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 IGHV3-72A0A0B4J1Y9 119 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 IGKV1-6A0A0C4DH72 117 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 IGKV1-12A0A0C4DH73 117 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 A0A0J9YXY3 114 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 SRRM5B3KS81 715 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 C3orf84H3BNL1 204 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 SERF1AO75920 110 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 SIX6O95475 246 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 TCL1BO95988 128 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 IGKV1-39P01597 117 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 IGKV1D-12P01611 117 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 SHBGP04278 402 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 IGKV1D-39P04432 117 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 CCL4P13236 92 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 NFYAP23511 347 aaPredicted RBP1.86□□□□□ -2.11
PABPC1-211ENST00000519596 NPPCP23582 126 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 COL8A2P25067 703 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 FAUP35544 74 aaKnown RBP1.86□□□□□ -2.11
PABPC1-211ENST00000519596 FUSP35637 526 aaKnown RBP eCLIP1.86□□□□□ -2.11
PABPC1-211ENST00000519596 SSR2P43308 183 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 FXYD7P58549 80 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 BLCAPP62952 87 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 MIC13Q5XKP0 118 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 FAM104BQ5XKR9 115 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 ATP11AUNQ6ZP68 121 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 HMGN2P46Q86SG4 172 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 C5orf38Q86SI9 138 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 Q8N2B8 174 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 SIGLECL1Q8N7X8 197 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 C10orf105Q8TEF2 133 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 C7orf33Q8WU49 177 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 ITLN1Q8WWA0 313 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 ITLN2Q8WWU7 325 aaPredicted RBP1.86□□□□□ -2.11
PABPC1-211ENST00000519596 FGF13Q92913 245 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 ZNF414Q96IQ9 312 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 B9D2Q9BPU9 175 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 FGF23Q9GZV9 251 aaPredicted RBP1.86□□□□□ -2.11
PABPC1-211ENST00000519596 LY96Q9Y6Y9 160 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 PIK3C2BO00750 1634 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 MADDQ8WXG6 1647 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 MCM3APO60318 1980 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 PTPRBP23467 1997 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 LRRC9Q6ZRR7 1453 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 ATAD5Q96QE3 1844 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 KIF1AQ12756 1690 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 CDK13Q14004 1512 aaKnown RBP1.86□□□□□ -2.11
PABPC1-211ENST00000519596 POLEQ07864 2286 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 ZNF318Q5VUA4 2279 aa1.86□□□□□ -2.11
PABPC1-211ENST00000519596 SCN9AQ15858 1988 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 RAPGEF6Q8TEU7 1601 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 PCNX3Q9H6A9 2034 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 IGHV3-35A0A0C4DH35 117 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 IGHV7-4-1A0A0J9YVY3 117 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 A8MU10 97 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 SYS1-DBNDD2H3BUS1 97 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 K7ERS5 55 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 LYRM1O43325 122 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 TIMM17BO60830 172 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 IGLV2-23P01705 113 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 IGHV3-23P01764 117 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 IGHV3-13P01766 116 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 IGHV3-7P01780 117 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 IGKV1-16P04430 117 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 DNAH10OSP0CZ25 163 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 PTHLHP12272 177 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 PIPP12273 146 aaPredicted RBP1.85□□□□□ -2.11
PABPC1-211ENST00000519596 CKS2P33552 79 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 CCL8P80075 99 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 MRPL51Q4U2R6 128 aaKnown RBP1.85□□□□□ -2.11
PABPC1-211ENST00000519596 PATE2Q6UY27 113 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 FP248Q71RG6 208 aaPredicted RBP1.85□□□□□ -2.11
PABPC1-211ENST00000519596 SPATA12Q7Z6I5 190 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 Q8N7P7 452 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 FAM213BQ8TBF2 198 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 C18orf32Q8TCD1 76 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 MUCL1Q96DR8 90 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 DHRS4-AS1Q9P1J3 65 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 DEC1Q9P2X7 70 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 ZNF222Q9UK12 451 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 CELA1Q9UNI1 258 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 HHLA3Q9XRX5 114 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 ROBO1Q9Y6N7 1651 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 ADAMTS9Q9P2N4 1935 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 ARHGEF28Q8N1W1 1705 aaKnown RBP1.85□□□□□ -2.11
PABPC1-211ENST00000519596 SCN8AQ9UQD0 1980 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 RGPD8O14715 1765 aaPredicted RBP1.85□□□□□ -2.11
PABPC1-211ENST00000519596 RGPD5Q99666 1765 aa1.85□□□□□ -2.11
PABPC1-211ENST00000519596 PATJQ8NI35 1801 aa1.84□□□□□ -2.11
PABPC1-211ENST00000519596 LAMC1P11047 1609 aa1.84□□□□□ -2.11
PABPC1-211ENST00000519596 TSPOAP1O95153 1857 aa1.84□□□□□ -2.11
PABPC1-211ENST00000519596 TRBV24-1A0A075B6N3 115 aa1.84□□□□□ -2.11
PABPC1-211ENST00000519596 IGHV3-49A0A0A0MS15 119 aa1.84□□□□□ -2.11
PABPC1-211ENST00000519596 TRAV14DV4A0A0A6YYC5 116 aa1.84□□□□□ -2.11
PABPC1-211ENST00000519596 IGHV3-21A0A0B4J1V1 117 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms