RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 CLRN3Q8NCR9 226 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 OR2K2Q8NGT1 345 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 BTF3L4Q96K17 158 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 NRN1Q9NPD7 142 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 IGHV3OR16-13A0A075B7E8 117 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 IGHV3-74A0A0B4J1X5 117 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 DIRC3C9JPN6 131 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 LTAP01374 205 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 MT-ND4LP03901 98 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 RPL35P42766 123 aaKnown RBP5.68□□□□□ -1.5
SDCBP-206ENST00000519115 GNG4P50150 75 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 LEMD1Q68G75 181 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 FAM231DQ6ZW35 169 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 LINC01551Q86U37 167 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 BLNKQ8WV28 456 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 C17orf77Q96MU5 243 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 FAM110AQ9BQ89 295 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 MLST8Q9BVC4 326 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 COL7A1Q02388 2944 aa5.68□□□□□ -1.5
SDCBP-206ENST00000519115 SCO2A0A1W2PP80 73 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 FAM231BA6NCW3 169 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 SOCS3O14543 225 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 GCGP01275 180 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 AKR1C3P42330 323 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 UBE2G1P62253 170 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 PSG3Q16557 428 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 C9orf47Q6ZRZ4 202 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 GTSCR1Q86UQ5 136 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 BAGE2Q86Y30 109 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 TMEM183AQ8IXX5 376 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 Q8N1Y9 231 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 LINC00477Q96M19 166 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 ASCL2Q99929 193 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 B9D2Q9BPU9 175 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 WFDC10AQ9H1F0 79 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 OSTCQ9NRP0 149 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 SMCO4Q9NRQ5 59 aa5.67□□□□□ -1.5
SDCBP-206ENST00000519115 IGKV3-7A0A075B6H7 116 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 TRAV9-1A0A075B6T8 112 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 IGHV3-66A0A0C4DH42 116 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 C7orf77A4D0Y5 90 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 APOHP02749 345 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-206ENST00000519115 CD7P09564 240 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 FRMD6-AS1P0C7T7 363 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 IGHV4-30-4P0DP06 118 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 SNRPD3P62318 126 aaKnown RBP5.66□□□□□ -1.5
SDCBP-206ENST00000519115 RPL23P62829 140 aaKnown RBP5.66□□□□□ -1.5
SDCBP-206ENST00000519115 RPL19P84098 196 aaKnown RBP5.66□□□□□ -1.5
SDCBP-206ENST00000519115 FLI1Q01543 452 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-206ENST00000519115 TCF24Q7RTU0 167 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 OCC1Q8TAD7 63 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 DCANP1Q8TF63 244 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 C16orf92Q96LL3 132 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 IGF2BP2-AS1Q96M15 143 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 CLUHP3Q96NS8 147 aa5.66□□□□□ -1.5
SDCBP-206ENST00000519115 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 TRBV20OR9-2A0A075B6H5 130 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 M0R036 132 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 EIF3GO75821 320 aaKnown RBP eCLIP5.65□□□□□ -1.5
SDCBP-206ENST00000519115 GHRHP01286 108 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 IGLV2-11P01706 119 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 CT83Q5H943 113 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 RBPMS2Q6ZRY4 209 aaKnown RBP5.65□□□□□ -1.5
SDCBP-206ENST00000519115 EXOC3-AS1Q8N2X6 119 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 C15orf54Q8N8G6 183 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 ISOC2Q96AB3 205 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 ODF3Q96PU9 254 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 SPAG8Q99932 426 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-206ENST00000519115 SAV1Q9H4B6 383 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-206ENST00000519115 ZNF492Q9P255 531 aa5.65□□□□□ -1.5
SDCBP-206ENST00000519115 AGRNO00468 2067 aa5.65□□□□□ -1.51
SDCBP-206ENST00000519115 TENM3Q9P273 2699 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 TRAV8-2A0A0B4J237 113 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 OR11H12B2RN74 326 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 K7EQG2 157 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 SLC17A3O00476 420 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 DUSP14O95147 198 aaKnown RBP5.64□□□□□ -1.51
SDCBP-206ENST00000519115 IGLV2-8P01709 118 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 TFPI2P48307 235 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 CEBPGP53567 150 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 FOXA3P55318 350 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-206ENST00000519115 RNF212Q495C1 297 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 SBSPONQ8IVN8 264 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 GBGT1Q8N5D6 347 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 DEFB125Q8N687 156 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 OR4B1Q8NGF8 309 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 SFRP2Q96HF1 295 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 NDFIP1Q9BT67 221 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 DERL1Q9BUN8 251 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 MS4A6AQ9H2W1 248 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 PSG8Q9UQ74 426 aa5.64□□□□□ -1.51
SDCBP-206ENST00000519115 TRBV24-1A0A075B6N3 115 aa5.63□□□□□ -1.51
SDCBP-206ENST00000519115 OR4C46A6NHA9 309 aa5.63□□□□□ -1.51
SDCBP-206ENST00000519115 NPIPB6E9PJ23 425 aa5.63□□□□□ -1.51
SDCBP-206ENST00000519115 DNASE2O00115 360 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-206ENST00000519115 ZNF138P52744 262 aa5.63□□□□□ -1.51
SDCBP-206ENST00000519115 RPL11P62913 178 aaKnown RBP5.63□□□□□ -1.51
SDCBP-206ENST00000519115 ADIRFQ15847 76 aa5.63□□□□□ -1.51
SDCBP-206ENST00000519115 ZNF674Q2M3X9 581 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms