RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 LYRM1O43325 122 aa-0.77□□□□□ -2.53
PCM1-208ENST00000518877 HSPE1P61604 102 aaKnown RBP-0.77□□□□□ -2.53
PCM1-208ENST00000518877 SNRPD3P62318 126 aaKnown RBP-0.77□□□□□ -2.53
PCM1-208ENST00000518877 CCL7P80098 99 aa-0.77□□□□□ -2.53
PCM1-208ENST00000518877 LIN52Q52LA3 116 aa-0.77□□□□□ -2.53
PCM1-208ENST00000518877 DEFB132Q7Z7B7 95 aa-0.77□□□□□ -2.53
PCM1-208ENST00000518877 HECTD4Q9Y4D8 3996 aa-0.77□□□□□ -2.53
PCM1-208ENST00000518877 ANK1P16157 1881 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 CHD6Q8TD26 2715 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 CSMD3Q7Z407 3707 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 NISCHQ9Y2I1 1504 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 AKAP6Q13023 2319 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 F5P12259 2224 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 FXYD1O00168 92 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 HIST1H2BKO60814 126 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 HIST1H2BJP06899 126 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 CST2P09228 141 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 CEBPGP53567 150 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 ERVS71-1P61550 626 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 GNG5P63218 68 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 AKIRIN2Q53H80 203 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 BTF3L4Q96K17 158 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 PAIP2Q9BPZ3 127 aaKnown RBP-0.78□□□□□ -2.53
PCM1-208ENST00000518877 MAP1LC3BQ9GZQ8 125 aa-0.78□□□□□ -2.53
PCM1-208ENST00000518877 IFNA4P05014 189 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 GYPBP06028 91 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 SPRR2DP22532 72 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 CDKN2CP42773 168 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 HBBP68871 147 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 HACD4Q5VWC8 232 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 PHF5AQ7RTV0 110 aaKnown RBP-0.79□□□□□ -2.54
PCM1-208ENST00000518877 DGCR14Q96DF8 476 aaKnown RBP-0.79□□□□□ -2.54
PCM1-208ENST00000518877 CARD19Q96LW7 228 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 OR2J1Q9GZK6 312 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 COMMD3Q9UBI1 195 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 PRNDQ9UKY0 176 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 SLC22A13Q9Y226 551 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 TANC2Q9HCD6 1990 aa-0.79□□□□□ -2.54
PCM1-208ENST00000518877 ALMS1Q8TCU4 4167 aa-0.8□□□□□ -2.54
PCM1-208ENST00000518877 TRAV5A0A0B4J249 113 aa-0.8□□□□□ -2.54
PCM1-208ENST00000518877 SNCBQ16143 134 aa-0.8□□□□□ -2.54
PCM1-208ENST00000518877 IFT20Q8IY31 132 aa-0.8□□□□□ -2.54
PCM1-208ENST00000518877 CCL4L1Q8NHW4 92 aa-0.8□□□□□ -2.54
PCM1-208ENST00000518877 PPP1R14BQ96C90 147 aa-0.8□□□□□ -2.54
PCM1-208ENST00000518877 OR4C12Q96R67 309 aa-0.8□□□□□ -2.54
PCM1-208ENST00000518877 EFCAB11Q9BUY7 163 aa-0.8□□□□□ -2.54
PCM1-208ENST00000518877 PDZD2O15018 2839 aa-0.81□□□□□ -2.54
PCM1-208ENST00000518877 C3orf85A0A1B0GTC6 90 aa-0.81□□□□□ -2.54
PCM1-208ENST00000518877 C1orf140Q5VVS0 124 aa-0.81□□□□□ -2.54
PCM1-208ENST00000518877 GRPEL2Q8TAA5 225 aa-0.81□□□□□ -2.54
PCM1-208ENST00000518877 ARMC1Q9NVT9 282 aa-0.81□□□□□ -2.54
PCM1-208ENST00000518877 MRPL35Q9NZE8 188 aaKnown RBP-0.81□□□□□ -2.54
PCM1-208ENST00000518877 MRPL36Q9P0J6 103 aaKnown RBP-0.81□□□□□ -2.54
PCM1-208ENST00000518877 TPRKBQ9Y3C4 175 aa-0.81□□□□□ -2.54
PCM1-208ENST00000518877 KIAA1549LQ6ZVL6 1849 aa-0.81□□□□□ -2.54
PCM1-208ENST00000518877 HERC1Q15751 4861 aa-0.81□□□□□ -2.54
PCM1-208ENST00000518877 CPDO75976 1380 aa-0.82□□□□□ -2.54
PCM1-208ENST00000518877 NDUFC2O95298 119 aa-0.82□□□□□ -2.54
PCM1-208ENST00000518877 SERPINA1P01009 418 aa-0.82□□□□□ -2.54
PCM1-208ENST00000518877 MT-ND6P03923 174 aa-0.82□□□□□ -2.54
PCM1-208ENST00000518877 MPC1LP0DKB6 136 aa-0.82□□□□□ -2.54
PCM1-208ENST00000518877 OGNP20774 298 aaKnown RBP-0.82□□□□□ -2.54
PCM1-208ENST00000518877 PIEZO2Q9H5I5 2752 aa-0.82□□□□□ -2.54
PCM1-208ENST00000518877 CD109Q6YHK3 1445 aa-0.82□□□□□ -2.54
PCM1-208ENST00000518877 SPAG17Q6Q759 2223 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 RTL9Q8NET4 1388 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 SPTBN2O15020 2390 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 A0A1W2PPB8 328 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 RIIAD1A6NNX1 92 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 KIR3DP1A8MWS1 328 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 IFNA14P01570 189 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 IGKCP01834 107 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 FABP4P15090 132 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 FKBP1CQ5VVH2 108 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 IZUMO2Q6UXV1 221 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 OTORQ9NRC9 128 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 TMEM14BQ9NUH8 114 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 BSNQ9UPA5 3926 aa-0.83□□□□□ -2.54
PCM1-208ENST00000518877 LRP1BQ9NZR2 4599 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 MAP1AP78559 2803 aaPredicted RBP-0.84□□□□□ -2.54
PCM1-208ENST00000518877 MAP1BP46821 2468 aaKnown RBP-0.84□□□□□ -2.54
PCM1-208ENST00000518877 H7C1C5 153 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 IGF2P01344 180 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 CSN2P05814 226 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 CTXN2P0C2S0 81 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 ETV6P41212 452 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 RPL35P42766 123 aaKnown RBP-0.84□□□□□ -2.54
PCM1-208ENST00000518877 LCN6P62502 163 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 KLKP1Q107X0 134 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 SPA17Q15506 151 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 DIRC1Q969H9 104 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 SS18L2Q9UHA2 77 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 MYH2Q9UKX2 1941 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 KMT2CQ8NEZ4 4911 aaKnown RBP-0.84□□□□□ -2.54
PCM1-208ENST00000518877 APC2O95996 2303 aa-0.84□□□□□ -2.54
PCM1-208ENST00000518877 MAP2P11137 1827 aaKnown RBP-0.85□□□□□ -2.54
PCM1-208ENST00000518877 HIGD1CA8MV81 97 aa-0.85□□□□□ -2.55
PCM1-208ENST00000518877 G3V2T6 193 aa-0.85□□□□□ -2.55
PCM1-208ENST00000518877 ATP5HO75947 161 aa-0.85□□□□□ -2.55
PCM1-208ENST00000518877 COX6A2Q02221 97 aa-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms