RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 OR10G9Q8NGN4 311 aa4.41□□□□□ -1.7
MRPS28-203ENST00000518371 OR10G7Q8NGN6 311 aa4.41□□□□□ -1.7
MRPS28-203ENST00000518371 FAM167A-AS1Q96KT0 104 aa4.41□□□□□ -1.7
MRPS28-203ENST00000518371 IGF2BP2-AS1Q96M15 143 aa4.41□□□□□ -1.7
MRPS28-203ENST00000518371 C11orf68Q9H3H3 251 aaKnown RBP4.41□□□□□ -1.7
MRPS28-203ENST00000518371 TNFSF18Q9UNG2 199 aa4.41□□□□□ -1.7
MRPS28-203ENST00000518371 PRELID1Q9Y255 219 aa4.41□□□□□ -1.7
MRPS28-203ENST00000518371 RFNGQ9Y644 331 aa4.41□□□□□ -1.7
MRPS28-203ENST00000518371 TENM3Q9P273 2699 aa4.41□□□□□ -1.7
MRPS28-203ENST00000518371 TRAV12-2A0A075B6T6 113 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 RNF222A6NCQ9 220 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 SMLR1H3BR10 107 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 BOLA2-SMG1P6H3BVE0 249 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 M0R3E3 92 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 TAAR5O14804 337 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 EIF3GO75821 320 aaKnown RBP eCLIP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 NDUFB4O95168 129 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 INSP01308 110 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 HBE1P02100 147 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 MBP02144 154 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 RBMY1A1P0DJD3 496 aaKnown RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 RBMY1CP0DJD4 496 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 ATP6V0CP27449 155 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 TSPOP30536 169 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 CSN1S1P47710 185 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 EMP1P54849 157 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 NANOS2P60321 138 aaKnown RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 RAB2AP61019 212 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 RANP62826 216 aaKnown RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 UBE2L3P68036 154 aaKnown RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 SERF2P84101 59 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 PDE6HQ13956 83 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 RBMY1FQ15415 496 aaKnown RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 RRN3P1Q2M238 152 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 KHDC3LQ587J8 217 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 RPL7L1Q6DKI1 246 aaKnown RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 AMTNQ6UX39 209 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 ZNF705AQ6ZN79 300 aaPredicted RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 C1orf158Q8N1D5 194 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 EXOC3-AS1Q8N2X6 119 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 Q8NAQ8 132 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 CLRN3Q8NCR9 226 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 OR2G3Q8NGZ4 309 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 FXYD5Q96DB9 178 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 GNPNAT1Q96EK6 184 aaPredicted RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 MRPL53Q96EL3 112 aaKnown RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 LINC01587Q99440 93 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 PSMG3Q9BT73 122 aaPredicted RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 KLK5Q9Y337 293 aaPredicted RBP4.4□□□□□ -1.71
MRPS28-203ENST00000518371 COL7A1Q02388 2944 aa4.4□□□□□ -1.71
MRPS28-203ENST00000518371 TMEM189A5PLL7 270 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 NUPR2A6NF83 97 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 A8MTW9 85 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 J3KRW8 73 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 HMGB3O15347 200 aaKnown RBP4.39□□□□□ -1.71
MRPS28-203ENST00000518371 JTBO76095 146 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 HTN1P15515 57 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 LEPP41159 167 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 CDKN1BP46527 198 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 CDC34P49427 236 aaPredicted RBP4.39□□□□□ -1.71
MRPS28-203ENST00000518371 ERCC8Q13216 396 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
MRPS28-203ENST00000518371 PQLC2Q6ZP29 291 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 BAP18Q8IXM2 172 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 LYPD1Q8N2G4 141 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 RPP25LQ8N5L8 163 aaKnown RBP4.39□□□□□ -1.71
MRPS28-203ENST00000518371 PHLDA1Q8WV24 401 aaPredicted RBP4.39□□□□□ -1.71
MRPS28-203ENST00000518371 LINC00477Q96M19 166 aa4.39□□□□□ -1.71
MRPS28-203ENST00000518371 ACTR3CQ9C0K3 210 aaPredicted RBP4.39□□□□□ -1.71
MRPS28-203ENST00000518371 A0A0D9SG52 128 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 LOC102723971A0A1B0GUV8 181 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 PGPA6NDG6 321 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 ZNF705GA8MUZ8 300 aaPredicted RBP4.38□□□□□ -1.71
MRPS28-203ENST00000518371 G3V3Q6 166 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 CRXO43186 299 aaPredicted RBP4.38□□□□□ -1.71
MRPS28-203ENST00000518371 SPART-AS1P0CW21 52 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 CT45A10P0DMU9 189 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 FAM74A1Q5RGS3 127 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 AKR1C8PQ5T2L2 129 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 TMEM78Q5T7P6 136 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 IQCF2Q8IXL9 164 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 TMEM256Q8N2U0 113 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 CMTM2Q8TAZ6 248 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 RXFP4Q8TDU9 374 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 RAB24Q969Q5 203 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 PHYHIPLQ96FC7 376 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 HYLS1Q96M11 299 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 ARPC5LQ9BPX5 153 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 AGPAT4-IT1Q9H0P7 198 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 SH3BGRL3Q9H299 93 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 Q9H3A6 140 aa4.38□□□□□ -1.71
MRPS28-203ENST00000518371 IGKV2-40A0A087WW87 121 aaPredicted RBP4.37□□□□□ -1.71
MRPS28-203ENST00000518371 TRAV12-3A0A0B4J271 114 aa4.37□□□□□ -1.71
MRPS28-203ENST00000518371 KANTRA0A1W2PQU2 76 aa4.37□□□□□ -1.71
MRPS28-203ENST00000518371 HMSDA8MTL9 139 aa4.37□□□□□ -1.71
MRPS28-203ENST00000518371 C11orf94C9JXX5 98 aa4.37□□□□□ -1.71
MRPS28-203ENST00000518371 PFDN1O60925 122 aa4.37□□□□□ -1.71
MRPS28-203ENST00000518371 CXorf1O96002 111 aa4.37□□□□□ -1.71
MRPS28-203ENST00000518371 IGKV2D-40P01614 121 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms