RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 ATP5G3P48201 142 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 PSMB3P49720 205 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 CEBPGP53567 150 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 H2BFSP57053 126 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 AP3S2P59780 193 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 CXCR4P61073 352 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 COPZ1P61923 177 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 ENDOGQ14249 297 aaKnown RBP1.76□□□□□ -2.13
CPNE3-204ENST00000517862 HIST3H3Q16695 136 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 FAM104BQ5XKR9 115 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 SLC25A34Q6PIV7 304 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 HEPN1Q6WQI6 88 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 GID4Q8IVV7 300 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 AMN1Q8IY45 258 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 LRRC34Q8IZ02 419 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF709Q8N972 641 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 DTD1Q8TEA8 209 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 RTN4IP1Q8WWV3 396 aaPredicted RBP1.76□□□□□ -2.13
CPNE3-204ENST00000517862 USMG5Q96IX5 58 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 GNB1LQ9BYB4 327 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 OR51I1Q9H343 314 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 KCNIP2Q9NS61 270 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 TAS2R7Q9NYW3 318 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 IGHV3-21A0A0B4J1V1 117 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 TRAV1-1A0A0B4J248 108 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 IGKV1-12A0A0C4DH73 117 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 A0A1W2PQL4 384 aaPredicted RBP1.75□□□□□ -2.13
CPNE3-204ENST00000517862 OR6C6A6NF89 314 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 OR2T8A6NH00 312 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 OR5H14A6NHG9 310 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 A8MWP4 228 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 H3BUA1 57 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 K7ERS5 55 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 M0R036 132 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 GGCTO75223 188 aaKnown RBP1.75□□□□□ -2.13
CPNE3-204ENST00000517862 TCRBP04435 133 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 MT1FP04733 61 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 MLNP12872 115 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 NFYBP25208 207 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 INPP1P49441 399 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 NUDT2P50583 147 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 LINC00313P59037 77 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 LSM6P62312 80 aaKnown RBP1.75□□□□□ -2.13
CPNE3-204ENST00000517862 RBX1P62877 108 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 FUT5Q11128 374 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 SCGB1D4Q6XE38 83 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 S100A7AQ86SG5 101 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 GPR32P1Q8NGA4 272 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 TLCD1Q96CP7 247 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 DPH3Q96FX2 82 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 ACY3Q96HD9 319 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 LINC00167Q96N53 147 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 PBOV1Q9GZY1 135 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 GTSF1LQ9H1H1 148 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 MRPL27Q9P0M9 148 aaKnown RBP1.75□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF492Q9P255 531 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 RAB26Q9ULW5 256 aa1.75□□□□□ -2.13
CPNE3-204ENST00000517862 TRAV36DV7A0A075B6V5 113 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 IGKV1OR2-108A0A075B7D4 117 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 IGKV1D-43A0A0B4J1Z2 117 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 A0A0B4J2C4 111 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF729A6NN14 1252 aaPredicted RBP1.74□□□□□ -2.13
CPNE3-204ENST00000517862 A8MUU9 505 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.74□□□□□ -2.13
CPNE3-204ENST00000517862 RBBP9O75884 186 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 LTAP01374 205 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 CRYGDP07320 174 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 CTSDP07339 412 aaPredicted RBP1.74□□□□□ -2.13
CPNE3-204ENST00000517862 CTXN2P0C2S0 81 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 HIST1H1EP10412 219 aaKnown RBP1.74□□□□□ -2.13
CPNE3-204ENST00000517862 MT4P47944 62 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 KRTAP10-10P60014 251 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 HERVK_113P63121 156 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 TSPAN31Q12999 210 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 MOBPQ13875 183 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 SMIM21Q3B7S5 101 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 C3orf62Q6ZUJ4 267 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 GPHB5Q86YW7 130 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 C10orf126Q8N4M7 172 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 KRTCAP2Q8N6L1 136 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 ST20-AS1Q8NBB2 130 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 OR8A1Q8NGG7 326 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 OR5D16Q8NGK9 328 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 OR10X1Q8NGY0 326 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 GALMQ96C23 342 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 OR7D2Q96RA2 312 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 SDHCQ99643 169 aaPredicted RBP1.74□□□□□ -2.13
CPNE3-204ENST00000517862 POLR1DQ9Y2S0 133 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 ICOSQ9Y6W8 199 aa1.74□□□□□ -2.13
CPNE3-204ENST00000517862 IGKV3-7A0A075B6H7 116 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 TEX50A0A1B0GTY4 177 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF98A6NK75 572 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF705FA8MVS1 300 aaPredicted RBP1.73□□□□□ -2.13
CPNE3-204ENST00000517862 COPEO14579 308 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 NOS1APO75052 506 aaPredicted RBP1.73□□□□□ -2.13
CPNE3-204ENST00000517862 DCTN3O75935 186 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 GUSBP08236 651 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF705DP0CH99 300 aaPredicted RBP1.73□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF705BP0CI00 300 aaPredicted RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms