RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 GATA4P43694 442 aa8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 RUSC1-AS1Q66K80 236 aa8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 MS4A6AQ9H2W1 248 aa8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 MRPL16Q9NX20 251 aaKnown RBP8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 SETD2Q9BYW2 2564 aaPredicted RBP8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 TLN2Q9Y4G6 2542 aa8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 FCN3O75636 299 aa8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 IGLV1-44P01699 117 aa8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 SSBP2P81877 361 aaPredicted RBP8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 HIVEP2P31629 2446 aa8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 PROP1O75360 226 aa8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 NDUFA4L2Q9NRX3 87 aa8.67□□□□□ -1.02
PCDHGA1-202ENST00000517417 G3V318 75 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 NSUN5P1Q3KNT7 163 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 IFI27L1Q96BM0 104 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 NXT2Q9NPJ8 142 aaKnown RBP8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 IGHV1-24A0A0C4DH33 117 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 PPBPP02775 128 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 MORN5Q5VZ52 161 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 ZNF562Q6V9R5 426 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 IGF2BP2-AS1Q96M15 143 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 VCX2Q9H322 139 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 TOMM40O96008 361 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 SRSF1Q07955 248 aaKnown RBP eCLIP8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 NAA38Q9BRA0 125 aaKnown RBP8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 OVOL3O00110 214 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 PIP4P2Q8N4L2 257 aa8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 RNASE8Q8TDE3 154 aaKnown RBP8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 WIPF2Q8TF74 440 aaPredicted RBP8.66□□□□□ -1.02
PCDHGA1-202ENST00000517417 IGHV3-73A0A0B4J1V6 119 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 IGLC7A0M8Q6 106 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 NDUFS7O75251 213 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 WT1-ASQ06250 92 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 SPRNQ5BIV9 151 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 TRAV12-3A0A0B4J271 114 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 A0A1B0GV72 72 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 OVOL1O14753 267 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 DUSP14O95147 198 aaKnown RBP8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 GRNP28799 593 aaKnown RBP8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 POU2AF1Q16633 256 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 TMEM101Q96IK0 257 aa8.65□□□□□ -1.02
PCDHGA1-202ENST00000517417 IGKV1OR2-108A0A075B7D4 117 aa8.65□□□□□ -1.03
PCDHGA1-202ENST00000517417 SAMD13Q5VXD3 122 aa8.65□□□□□ -1.03
PCDHGA1-202ENST00000517417 RNF114Q9Y508 228 aa8.65□□□□□ -1.03
PCDHGA1-202ENST00000517417 A0A0U1RRA0 63 aa8.65□□□□□ -1.03
PCDHGA1-202ENST00000517417 RIPPLY3P57055 190 aa8.65□□□□□ -1.03
PCDHGA1-202ENST00000517417 FXYD5Q96DB9 178 aa8.65□□□□□ -1.03
PCDHGA1-202ENST00000517417 RHPN1-AS1Q9BWJ2 59 aa8.65□□□□□ -1.03
PCDHGA1-202ENST00000517417 MEGF9Q9H1U4 602 aa8.65□□□□□ -1.03
PCDHGA1-202ENST00000517417 PRSS46E5RG02 174 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 ATP6V0E1O15342 81 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 SH2D1AO60880 128 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 NDUFB8O95169 186 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 KLF5Q13887 457 aaPredicted RBP8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 Q8N7P7 452 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 NHP2Q9NX24 153 aaKnown RBP8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 CYSLTR1Q9Y271 337 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 PRRC2CQ9Y520 2896 aaKnown RBP8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 ERCC8Q13216 396 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 Q86TA4 180 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 CST9LQ9H4G1 147 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 SPCS1Q9Y6A9 102 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 SMKR1H3BMG3 65 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 CD5LO43866 347 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 IFI27P40305 119 aaPredicted RBP8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 DSCR9P59020 149 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 LINC00310P59036 64 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 SEC11AP67812 179 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 PSG3Q16557 428 aa8.64□□□□□ -1.03
PCDHGA1-202ENST00000517417 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 CFHR2P36980 270 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 CD300EQ496F6 205 aaPredicted RBP8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 C14orf178Q8N769 122 aaPredicted RBP8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 ZNF503Q96F45 646 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 TRBV7-1A0A0A6YYK4 115 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 GUSBP1Q15486 140 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 NACAE9PAV3 2078 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 GAGE12BA1L429 117 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 OCIAD2Q56VL3 154 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 RNF182Q8N6D2 247 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 ZNF492Q9P255 531 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 WISP2O76076 250 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 DPM2O94777 84 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 ARMS2P0C7Q2 107 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 SYNJ2BPP57105 145 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 SHANK2-AS3Q9BTD1 123 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 NCOR1P1Q9H4R4 102 aa8.63□□□□□ -1.03
PCDHGA1-202ENST00000517417 SAP30O75446 220 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 CT83Q5H943 113 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 UTF1Q5T230 341 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 BVES-AS1Q5T3Y7 98 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 LCNL1Q6ZST4 164 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 ZNF833PQ6ZTB9 187 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 LINC00173Q6ZV60 143 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 C9orf139Q6ZV77 190 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 IGFBPL1Q8WX77 278 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms