RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CTXND1A0A1B0GTU2 59 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 A0A1W2PN81 502 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 SH2D7A6NKC9 451 aaPredicted RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 FAM223BA6NKX1 122 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 LINC01548A6NM66 108 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 TEX22C9J3V5 150 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 FAM90A26D6RGX4 464 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 H3BP45 60 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 K7EP13 123 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 ATP6V0E1O15342 81 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 CCL25O15444 150 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 TNFSF12O43508 249 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 NXPH3O95157 252 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 CA2P00918 260 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 KRASP01116 189 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 OR9G9P0C7N8 305 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 CHRNA7P36544 502 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 RPL27AP46776 148 aaKnown RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 TFPI2P48307 235 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 SUB1P53999 127 aaKnown RBP eCLIP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 YPEL3P61236 119 aaPredicted RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 HSPE1P61604 102 aaKnown RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 GNB1P62873 340 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 VAMP2P63027 116 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 MT1HP80294 61 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 SSBP2P81877 361 aaPredicted RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 SERF2P84101 59 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 IZUMO4Q1ZYL8 232 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 VWC2Q2TAL6 325 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 Q6ZRU5 148 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 H2BFWTQ7Z2G1 175 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 LINC01551Q86U37 167 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 FAM223AQ8IWN6 122 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF491Q8N8L2 437 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 OR1L8Q8NGR8 309 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 OR1N2Q8NGR9 330 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 VN1R17PQ8TDU5 208 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 DTD1Q8TEA8 209 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 ORAOV1Q8WV07 137 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 C4orf3Q8WVX3 66 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 SRSF12Q8WXF0 261 aaKnown RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 DLX4Q92988 240 aaPredicted RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 RPUSD4Q96CM3 377 aaKnown RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 ANAPC16Q96DE5 110 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 RNF125Q96EQ8 232 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 MS4A10Q96PG2 267 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 RAB40CQ96S21 281 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 HSPB9Q9BQS6 159 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 QTRT1Q9BXR0 403 aaKnown RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 COMMD5Q9GZQ3 224 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 WDR61Q9GZS3 305 aaKnown RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 FNDC4Q9H6D8 234 aaPredicted RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 SLC25A22Q9H936 323 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 DNAJC4Q9NNZ3 241 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 MANBALQ9NQG1 85 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 NDUFA4L2Q9NRX3 87 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM140Q9NV12 185 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 ZFP30Q9Y2G7 519 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 TRAV9-1A0A075B6T8 112 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 TRBV7-1A0A0A6YYK4 115 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 TEX50A0A1B0GTY4 177 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 UBE2L5PA0A1B0GUS4 154 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 IGLC7A0M8Q6 106 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 GRIFINA4D1Z8 144 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 C15orf61A6NNL5 157 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 G3V318 75 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 CORTO00230 105 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 SYNGR2O43760 224 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 SERF1AO75920 110 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 S1PR2O95136 353 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 SCGB1D1O95968 90 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 IFNA1P01562 189 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 PPBPP02775 128 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 LGALS1P09382 135 aaKnown RBP2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 IGLC2P0DOY2 106 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 IGLC3P0DOY3 106 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 IAPPP10997 89 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 CBLN1P23435 193 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 FCGR2BP31994 310 aaPredicted RBP2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 G6PCP35575 357 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 RANP62826 216 aaKnown RBP2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 RPP30P78346 268 aaKnown RBP2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 ERHP84090 104 aaKnown RBP2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 NDPQ00604 133 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 PRCDQ00LT1 54 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 ATP5G2Q06055 141 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 SLC38A11Q08AI6 406 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 Q0VG73 95 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 TNXAQ16473 311 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 SAPCD1Q5SSQ6 148 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 COL5A1-AS1Q5SY13 56 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 FAM78BQ5VT40 261 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 UNQ5815/PRO19632Q6UWF5 114 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 TOMM20LQ6UXN7 152 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 NIT1Q86X76 327 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 VKORC1L1Q8N0U8 176 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 OR4B1Q8NGF8 309 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 OR4A16Q8NH70 328 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 CMTM2Q8TAZ6 248 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms