RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 IGKV2D-40P01614 121 aaPredicted RBP7.17□□□□□ -1.26
TPM3-222ENST00000515609 IGLV2-8P01709 118 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 S100A8P05109 93 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 CSN3P07498 182 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 RAB5AP20339 215 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 FAM3BP58499 235 aaPredicted RBP7.17□□□□□ -1.26
TPM3-222ENST00000515609 ELOBQ15370 118 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 RASL11AQ6T310 242 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 RNF182Q8N6D2 247 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 C11orf44Q8N8P7 122 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 OR8A1Q8NGG7 326 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 BORCS7Q96B45 105 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 FAM210BQ96KR6 192 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 ODF3Q96PU9 254 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 MCRIP2Q9BUT9 160 aaKnown RBP7.17□□□□□ -1.26
TPM3-222ENST00000515609 RPP21Q9H633 154 aaKnown RBP7.17□□□□□ -1.26
TPM3-222ENST00000515609 AURKAIP1Q9NWT8 199 aaPredicted RBP7.17□□□□□ -1.26
TPM3-222ENST00000515609 NAT8BQ9UHF3 227 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 URGCP-MRPS24S4R325 110 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 CELSR1Q9NYQ6 3014 aa7.17□□□□□ -1.26
TPM3-222ENST00000515609 IGKV3-7A0A075B6H7 116 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 TRAV8-1A0A0A6YYK1 113 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 COLCA2A8K830 154 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 C1orf196B1AJZ1 125 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 LEPP41159 167 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 SRSF2Q01130 221 aaKnown RBP7.16□□□□□ -1.26
TPM3-222ENST00000515609 HIST1H1AQ02539 215 aaPredicted RBP7.16□□□□□ -1.26
TPM3-222ENST00000515609 OR5I1Q13606 314 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 DEFB114Q30KQ6 69 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 NSUN5P1Q3KNT7 163 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 WDR73Q6P4I2 378 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 FOXI2Q6ZQN5 318 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 NUDT10Q8NFP7 164 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 TSKUQ8WUA8 353 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 NUDT11Q96G61 164 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 V9GYV3 84 aa7.16□□□□□ -1.26
TPM3-222ENST00000515609 A0A1B0GW15 77 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 A0A1W2PPQ1 181 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 SMIM27A0A1W2PRY6 76 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 C19orf71A6NCJ1 209 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 ZNF705FA8MVS1 300 aaPredicted RBP7.15□□□□□ -1.26
TPM3-222ENST00000515609 MT-ND6P03923 174 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 PFN1P07737 140 aaKnown RBP7.15□□□□□ -1.26
TPM3-222ENST00000515609 RAB5BP61020 215 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 PSMG4Q5JS54 123 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 C18orf65Q6ZTR6 163 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 ATP5L2Q7Z4Y8 100 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 WFDC3Q8IUB2 231 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 NHLRC2Q8NBF2 726 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 SGK494Q96LW2 274 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 VGLL1Q99990 258 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 FAM110AQ9BQ89 295 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 PYGO2Q9BRQ0 406 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 GPR61Q9BZJ8 451 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 AGPAT4-IT1Q9H0P7 198 aa7.15□□□□□ -1.26
TPM3-222ENST00000515609 RNASE7Q9H1E1 156 aaKnown RBP7.15□□□□□ -1.26
TPM3-222ENST00000515609 FLNBO75369 2602 aaKnown RBP7.15□□□□□ -1.26
TPM3-222ENST00000515609 TRAV21A0A0B4J279 112 aa7.14□□□□□ -1.27
TPM3-222ENST00000515609 TMEM189A5PLL7 270 aa7.14□□□□□ -1.27
TPM3-222ENST00000515609 SAP30O75446 220 aa7.14□□□□□ -1.27
TPM3-222ENST00000515609 TYMSP04818 313 aa7.14□□□□□ -1.27
TPM3-222ENST00000515609 RPS10P46783 165 aaKnown RBP7.14□□□□□ -1.27
TPM3-222ENST00000515609 TFPI2P48307 235 aa7.14□□□□□ -1.27
TPM3-222ENST00000515609 IGFL4Q6B9Z1 124 aa7.14□□□□□ -1.27
TPM3-222ENST00000515609 SETXQ7Z333 2677 aaKnown RBP7.14□□□□□ -1.27
TPM3-222ENST00000515609 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.14□□□□□ -1.27
TPM3-222ENST00000515609 OR2D3Q8NGH3 330 aa7.14□□□□□ -1.27
TPM3-222ENST00000515609 DUX3Q96PT4 197 aa7.14□□□□□ -1.27
TPM3-222ENST00000515609 SRD5A3Q9H8P0 318 aa7.14□□□□□ -1.27
TPM3-222ENST00000515609 MTORP42345 2549 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 IZUMO1RA6ND01 250 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 F2Z2F3 143 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 AMBPP02760 352 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 GPX1P07203 203 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 CXCL1P09341 107 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 ZNF688P0C7X2 276 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 HLA-DMBP28068 263 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 NUTF2P61970 127 aaKnown RBP7.13□□□□□ -1.27
TPM3-222ENST00000515609 TMEM61Q8N0U2 210 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 TMEM158Q8WZ71 300 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 ZC2HC1AQ96GY0 325 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 YPEL4Q96NS1 127 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 CLUHP3Q96NS8 147 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 CITED1Q99966 193 aa7.13□□□□□ -1.27
TPM3-222ENST00000515609 ZMAT5Q9UDW3 170 aaKnown RBP7.13□□□□□ -1.27
TPM3-222ENST00000515609 A0A0J9YX75 114 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 ADARB2-AS1A8MUL3 147 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 PRAC2D3DTV9 90 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 SH2D1AO60880 128 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 ORM1P02763 201 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 CRISP2P16562 243 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 FOXA3P55318 350 aaPredicted RBP7.12□□□□□ -1.27
TPM3-222ENST00000515609 ERCC8Q13216 396 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 RIGQ13278 110 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 CD300EQ496F6 205 aaPredicted RBP7.12□□□□□ -1.27
TPM3-222ENST00000515609 C9orf66Q5T8R8 295 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 Q8TAT8 98 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 KCNS1Q96KK3 526 aa7.12□□□□□ -1.27
TPM3-222ENST00000515609 HIVEP1P15822 2718 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 TGIF2-C20orf24A0A0A6YYL0 155 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms