RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 CBY3A6NI87 242 aa10.24□□□□□ -0.77
SGCA-211ENST00000514934 ZNF324O75467 553 aaPredicted RBP10.24□□□□□ -0.77
SGCA-211ENST00000514934 MPC2O95563 127 aa10.24□□□□□ -0.77
SGCA-211ENST00000514934 ERCC8Q13216 396 aa10.24□□□□□ -0.77
SGCA-211ENST00000514934 CLINT1Q14677 625 aa10.24□□□□□ -0.77
SGCA-211ENST00000514934 PRR9Q5T870 116 aa10.24□□□□□ -0.77
SGCA-211ENST00000514934 C11orf72Q8NBR9 251 aa10.24□□□□□ -0.77
SGCA-211ENST00000514934 SLC25A31Q9H0C2 315 aa10.24□□□□□ -0.77
SGCA-211ENST00000514934 AGPAT4-IT1Q9H0P7 198 aa10.24□□□□□ -0.77
SGCA-211ENST00000514934 M0R2N4 97 aa10.23□□□□□ -0.77
SGCA-211ENST00000514934 CRISP2P16562 243 aa10.23□□□□□ -0.77
SGCA-211ENST00000514934 Q6ZQT7 251 aa10.23□□□□□ -0.77
SGCA-211ENST00000514934 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
SGCA-211ENST00000514934 LINC00336Q6ZUF6 198 aa10.23□□□□□ -0.77
SGCA-211ENST00000514934 ZFAND2AQ8N6M9 145 aa10.23□□□□□ -0.77
SGCA-211ENST00000514934 C15orf53Q8NAA6 179 aa10.23□□□□□ -0.77
SGCA-211ENST00000514934 NOP10Q9NPE3 64 aaKnown RBP10.23□□□□□ -0.77
SGCA-211ENST00000514934 HSPB11Q9Y547 144 aa10.23□□□□□ -0.77
SGCA-211ENST00000514934 TIMM8BQ9Y5J9 83 aaPredicted RBP10.23□□□□□ -0.77
SGCA-211ENST00000514934 TRAV12-3A0A0B4J271 114 aa10.22□□□□□ -0.77
SGCA-211ENST00000514934 HOXA5P20719 270 aa10.22□□□□□ -0.77
SGCA-211ENST00000514934 PHYHIPLQ96FC7 376 aa10.22□□□□□ -0.77
SGCA-211ENST00000514934 VGLL1Q99990 258 aa10.22□□□□□ -0.77
SGCA-211ENST00000514934 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
SGCA-211ENST00000514934 WFDC1Q9HC57 220 aa10.22□□□□□ -0.77
SGCA-211ENST00000514934 PPP1R14DQ9NXH3 145 aa10.22□□□□□ -0.77
SGCA-211ENST00000514934 PRELID1Q9Y255 219 aa10.22□□□□□ -0.77
SGCA-211ENST00000514934 APOBP04114 4563 aaKnown RBP10.21□□□□□ -0.77
SGCA-211ENST00000514934 IGLV2-18A0A075B6J9 118 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 IGKV2-40A0A087WW87 121 aaPredicted RBP10.21□□□□□ -0.77
SGCA-211ENST00000514934 IGKV2D-40P01614 121 aaPredicted RBP10.21□□□□□ -0.77
SGCA-211ENST00000514934 ATP5G1P05496 136 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 HTN1P15515 57 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 LEPP41159 167 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 ATP5G3P48201 142 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 BTN1A1Q13410 526 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 ZNRF2Q8NHG8 242 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 BLNKQ8WV28 456 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 RNF141Q8WVD5 230 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 ATP5SQ99766 215 aa10.21□□□□□ -0.77
SGCA-211ENST00000514934 MRPL32Q9BYC8 188 aaKnown RBP10.21□□□□□ -0.77
SGCA-211ENST00000514934 C7orf71A4D174 169 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 F5H768 121 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 J3KRW8 73 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 RLN2P04090 185 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 SLC25A5P05141 298 aaKnown RBP10.2□□□□□ -0.78
SGCA-211ENST00000514934 NBEAP1P0C6P0 100 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 S100A1P23297 94 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 NKX2-5P52952 324 aaPredicted RBP10.2□□□□□ -0.78
SGCA-211ENST00000514934 DAZ2Q13117 558 aaKnown RBP10.2□□□□□ -0.78
SGCA-211ENST00000514934 ICAM4Q14773 271 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 PYGO2Q9BRQ0 406 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 MBD2Q9UBB5 411 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 FUT9Q9Y231 359 aa10.2□□□□□ -0.78
SGCA-211ENST00000514934 HMSDA8MTL9 139 aa10.19□□□□□ -0.78
SGCA-211ENST00000514934 OR10J4P0C629 311 aa10.19□□□□□ -0.78
SGCA-211ENST00000514934 FAM3BP58499 235 aaPredicted RBP10.19□□□□□ -0.78
SGCA-211ENST00000514934 IFITM2Q01629 132 aa10.19□□□□□ -0.78
SGCA-211ENST00000514934 Q6ZTI0 123 aa10.19□□□□□ -0.78
SGCA-211ENST00000514934 LINC00477Q96M19 166 aa10.19□□□□□ -0.78
SGCA-211ENST00000514934 C18orf15Q96N68 181 aa10.19□□□□□ -0.78
SGCA-211ENST00000514934 OR51M1Q9H341 326 aa10.19□□□□□ -0.78
SGCA-211ENST00000514934 LINC00588Q9Y4M8 146 aa10.19□□□□□ -0.78
SGCA-211ENST00000514934 EIF3GO75821 320 aaKnown RBP eCLIP10.18□□□□□ -0.78
SGCA-211ENST00000514934 NMBP08949 121 aa10.18□□□□□ -0.78
SGCA-211ENST00000514934 RPL12P30050 165 aaKnown RBP10.18□□□□□ -0.78
SGCA-211ENST00000514934 ANXA2RQ3ZCQ2 193 aa10.18□□□□□ -0.78
SGCA-211ENST00000514934 UBE2DNLQ8IWF7 75 aa10.18□□□□□ -0.78
SGCA-211ENST00000514934 PAXXQ9BUH6 204 aa10.18□□□□□ -0.78
SGCA-211ENST00000514934 KCNIP2Q9NS61 270 aa10.18□□□□□ -0.78
SGCA-211ENST00000514934 ZNF492Q9P255 531 aa10.18□□□□□ -0.78
SGCA-211ENST00000514934 TIMM9Q9Y5J7 89 aa10.18□□□□□ -0.78
SGCA-211ENST00000514934 PRSS29PA6NIE9 313 aa10.17□□□□□ -0.78
SGCA-211ENST00000514934 FAM122CQ6P4D5 195 aa10.17□□□□□ -0.78
SGCA-211ENST00000514934 OR2T35Q8NGX2 323 aa10.17□□□□□ -0.78
SGCA-211ENST00000514934 SMIM3Q9BZL3 60 aa10.17□□□□□ -0.78
SGCA-211ENST00000514934 TMPRSS5Q9H3S3 457 aa10.17□□□□□ -0.78
SGCA-211ENST00000514934 ABCA13Q86UQ4 5058 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 GAGE12BA1L429 117 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 GAGE7O76087 117 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 GAGE12FP0CL80 117 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 GAGE12GP0CL81 117 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 GAGE12IP0CL82 117 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 PET100P0DJ07 73 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 FFAR4Q5NUL3 377 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 Q8TAT8 98 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 VSIG2Q96IQ7 327 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 KRTAP1-5Q9BYS1 174 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 AAMDCQ9H7C9 122 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 GSN-AS1Q9NRJ2 163 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 TP53TG3Q9ULZ0 132 aa10.16□□□□□ -0.78
SGCA-211ENST00000514934 TRAV26-1A0A087WT03 109 aa10.15□□□□□ -0.78
SGCA-211ENST00000514934 TRBV7-9A0A0J9YWB2 115 aa10.15□□□□□ -0.78
SGCA-211ENST00000514934 SPINK4O60575 86 aa10.15□□□□□ -0.78
SGCA-211ENST00000514934 NUDT3O95989 172 aa10.15□□□□□ -0.78
SGCA-211ENST00000514934 RNASE4P34096 147 aaKnown RBP10.15□□□□□ -0.78
SGCA-211ENST00000514934 TCL1AP56279 114 aa10.15□□□□□ -0.78
SGCA-211ENST00000514934 EIF4E3Q8N5X7 224 aaKnown RBP10.15□□□□□ -0.78
SGCA-211ENST00000514934 RXFP4Q8TDU9 374 aa10.15□□□□□ -0.78
SGCA-211ENST00000514934 Q9H3A6 140 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms