RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PYGO2Q9BRQ0 406 aa17.28■□□□□ 0.36
SNF8-213ENST00000514929 IGKV2-40A0A087WW87 121 aaPredicted RBP17.27■□□□□ 0.36
SNF8-213ENST00000514929 C7orf71A4D174 169 aa17.27■□□□□ 0.36
SNF8-213ENST00000514929 IGKV2D-40P01614 121 aaPredicted RBP17.27■□□□□ 0.36
SNF8-213ENST00000514929 TMEM78Q5T7P6 136 aa17.27■□□□□ 0.36
SNF8-213ENST00000514929 C9orf47Q6ZRZ4 202 aa17.27■□□□□ 0.36
SNF8-213ENST00000514929 PHYHIPLQ96FC7 376 aa17.27■□□□□ 0.36
SNF8-213ENST00000514929 SNURFLB1AK76 121 aa17.26■□□□□ 0.35
SNF8-213ENST00000514929 UBE2L3P68036 154 aaKnown RBP17.26■□□□□ 0.35
SNF8-213ENST00000514929 MED28Q9H204 178 aa17.26■□□□□ 0.35
SNF8-213ENST00000514929 WFDC1Q9HC57 220 aa17.26■□□□□ 0.35
SNF8-213ENST00000514929 DNAH10Q8IVF4 4471 aa17.25■□□□□ 0.35
SNF8-213ENST00000514929 TAS2R45P59539 299 aa17.25■□□□□ 0.35
SNF8-213ENST00000514929 KHDC3LQ587J8 217 aa17.25■□□□□ 0.35
SNF8-213ENST00000514929 FAM19A4Q96LR4 140 aa17.25■□□□□ 0.35
SNF8-213ENST00000514929 KLLNB2CW77 178 aa17.24■□□□□ 0.35
SNF8-213ENST00000514929 GPX1P07203 203 aa17.24■□□□□ 0.35
SNF8-213ENST00000514929 RANP62826 216 aaKnown RBP17.24■□□□□ 0.35
SNF8-213ENST00000514929 BTN1A1Q13410 526 aa17.24■□□□□ 0.35
SNF8-213ENST00000514929 RNF212Q495C1 297 aa17.24■□□□□ 0.35
SNF8-213ENST00000514929 ZNF503Q96F45 646 aa17.24■□□□□ 0.35
SNF8-213ENST00000514929 VGLL1Q99990 258 aa17.24■□□□□ 0.35
SNF8-213ENST00000514929 M0R2N4 97 aa17.23■□□□□ 0.35
SNF8-213ENST00000514929 RNASE4P34096 147 aaKnown RBP17.23■□□□□ 0.35
SNF8-213ENST00000514929 CSN1S1P47710 185 aa17.23■□□□□ 0.35
SNF8-213ENST00000514929 CD300CQ08708 224 aa17.23■□□□□ 0.35
SNF8-213ENST00000514929 CRISP2P16562 243 aa17.22■□□□□ 0.35
SNF8-213ENST00000514929 ACOT6Q3I5F7 207 aaPredicted RBP17.22■□□□□ 0.35
SNF8-213ENST00000514929 LYPD1Q8N2G4 141 aa17.22■□□□□ 0.35
SNF8-213ENST00000514929 Q9H3A6 140 aa17.22■□□□□ 0.35
SNF8-213ENST00000514929 GAGE12BA1L429 117 aa17.21■□□□□ 0.35
SNF8-213ENST00000514929 EIF3GO75821 320 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNF8-213ENST00000514929 GAGE7O76087 117 aa17.21■□□□□ 0.35
SNF8-213ENST00000514929 NUDT3O95989 172 aa17.21■□□□□ 0.35
SNF8-213ENST00000514929 NMBP08949 121 aa17.21■□□□□ 0.35
SNF8-213ENST00000514929 GAGE12FP0CL80 117 aa17.21■□□□□ 0.35
SNF8-213ENST00000514929 GAGE12GP0CL81 117 aa17.21■□□□□ 0.35
SNF8-213ENST00000514929 GAGE12IP0CL82 117 aa17.21■□□□□ 0.35
SNF8-213ENST00000514929 ATG101Q9BSB4 218 aa17.21■□□□□ 0.35
SNF8-213ENST00000514929 ZNF492Q9P255 531 aa17.21■□□□□ 0.35
SNF8-213ENST00000514929 IGLV2-18A0A075B6J9 118 aa17.2■□□□□ 0.34
SNF8-213ENST00000514929 A0A1W2PPV4 95 aa17.2■□□□□ 0.34
SNF8-213ENST00000514929 ZNF324O75467 553 aaPredicted RBP17.2■□□□□ 0.34
SNF8-213ENST00000514929 M6PRP20645 277 aa17.2■□□□□ 0.34
SNF8-213ENST00000514929 ZNF138P52744 262 aa17.2■□□□□ 0.34
SNF8-213ENST00000514929 LINC00612Q8N6U2 182 aa17.2■□□□□ 0.34
SNF8-213ENST00000514929 ZNF680Q8NEM1 530 aa17.2■□□□□ 0.34
SNF8-213ENST00000514929 ZNF266Q14584 549 aa17.19■□□□□ 0.34
SNF8-213ENST00000514929 EIF4E3Q8N5X7 224 aaKnown RBP17.19■□□□□ 0.34
SNF8-213ENST00000514929 ZFAND2AQ8N6M9 145 aa17.19■□□□□ 0.34
SNF8-213ENST00000514929 Q8TAT8 98 aa17.19■□□□□ 0.34
SNF8-213ENST00000514929 RAB2AP61019 212 aa17.18■□□□□ 0.34
SNF8-213ENST00000514929 DAZ2Q13117 558 aaKnown RBP17.18■□□□□ 0.34
SNF8-213ENST00000514929 OR5I1Q13606 314 aa17.18■□□□□ 0.34
SNF8-213ENST00000514929 LGALS9BQ3B8N2 356 aa17.18■□□□□ 0.34
SNF8-213ENST00000514929 AQP10Q96PS8 301 aa17.18■□□□□ 0.34
SNF8-213ENST00000514929 LINC00467Q9BRT7 94 aa17.18■□□□□ 0.34
SNF8-213ENST00000514929 GSN-AS1Q9NRJ2 163 aa17.18■□□□□ 0.34
SNF8-213ENST00000514929 RBAKDNA6NC62 111 aa17.17■□□□□ 0.34
SNF8-213ENST00000514929 PRR9Q5T870 116 aa17.17■□□□□ 0.34
SNF8-213ENST00000514929 HYLS1Q96M11 299 aa17.17■□□□□ 0.34
SNF8-213ENST00000514929 TRBV7-9A0A0J9YWB2 115 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 RGS13O14921 159 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 ANXA2RQ3ZCQ2 193 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 PQLC2Q6ZP29 291 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 Q6ZTI0 123 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 LINC00336Q6ZUF6 198 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 HSD17B11Q8NBQ5 300 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 OR10G4Q8NGN3 311 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 OR10G9Q8NGN4 311 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 OR10G7Q8NGN6 311 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 RXFP4Q8TDU9 374 aa17.16■□□□□ 0.34
SNF8-213ENST00000514929 GIPP09681 153 aaPredicted RBP17.15■□□□□ 0.34
SNF8-213ENST00000514929 FAM3BP58499 235 aaPredicted RBP17.15■□□□□ 0.34
SNF8-213ENST00000514929 FAM74A1Q5RGS3 127 aa17.15■□□□□ 0.34
SNF8-213ENST00000514929 C11orf72Q8NBR9 251 aa17.15■□□□□ 0.34
SNF8-213ENST00000514929 CMTM2Q8TAZ6 248 aa17.15■□□□□ 0.34
SNF8-213ENST00000514929 ASB13Q8WXK3 278 aa17.15■□□□□ 0.34
SNF8-213ENST00000514929 DIRC3C9JPN6 131 aa17.14■□□□□ 0.33
SNF8-213ENST00000514929 HMGB3O15347 200 aaKnown RBP17.14■□□□□ 0.33
SNF8-213ENST00000514929 GNPNAT1Q96EK6 184 aaPredicted RBP17.14■□□□□ 0.33
SNF8-213ENST00000514929 OTORQ9NRC9 128 aa17.14■□□□□ 0.33
SNF8-213ENST00000514929 TRGV2A0A075B6R0 118 aa17.13■□□□□ 0.33
SNF8-213ENST00000514929 IGHV1OR15-1A0A075B7D0 117 aa17.13■□□□□ 0.33
SNF8-213ENST00000514929 TRAV26-1A0A087WT03 109 aa17.13■□□□□ 0.33
SNF8-213ENST00000514929 PGPA6NDG6 321 aa17.13■□□□□ 0.33
SNF8-213ENST00000514929 CCL18P55774 89 aa17.13■□□□□ 0.33
SNF8-213ENST00000514929 Q5BKY6 102 aa17.13■□□□□ 0.33
SNF8-213ENST00000514929 ARPC5LQ9BPX5 153 aa17.13■□□□□ 0.33
SNF8-213ENST00000514929 TMPRSS5Q9H3S3 457 aa17.13■□□□□ 0.33
SNF8-213ENST00000514929 RPH3ALQ9UNE2 315 aa17.13■□□□□ 0.33
SNF8-213ENST00000514929 TRGV1A0A0A0MS02 117 aa17.12■□□□□ 0.33
SNF8-213ENST00000514929 HOXA5P20719 270 aa17.12■□□□□ 0.33
SNF8-213ENST00000514929 CDC34P49427 236 aaPredicted RBP17.12■□□□□ 0.33
SNF8-213ENST00000514929 TCL1AP56279 114 aa17.12■□□□□ 0.33
SNF8-213ENST00000514929 IBA57Q5T440 356 aaKnown RBP17.12■□□□□ 0.33
SNF8-213ENST00000514929 Q6ZQT7 251 aa17.12■□□□□ 0.33
SNF8-213ENST00000514929 INO80EQ8NBZ0 244 aaPredicted RBP17.12■□□□□ 0.33
SNF8-213ENST00000514929 OR2G3Q8NGZ4 309 aa17.12■□□□□ 0.33
SNF8-213ENST00000514929 PSMG3Q9BT73 122 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms