RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 PLA2G12AQ9BZM1 189 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 IGKV1D-8A0A087WSZ0 117 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 LOC107984156A0A0G2JMH3 177 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 A0A1W2PQD3 144 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 A8MUN3 132 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 HOXA3O43365 443 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-208ENST00000514335 UBE2L3P68036 154 aaKnown RBP5.53□□□□□ -1.52
NIPBL-208ENST00000514335 ARL17AQ8IVW1 177 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 HCSTQ9UBK5 93 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 LAMTOR3Q9UHA4 124 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 IGLV1-36A0A0B4J1U3 117 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 IGHV1-58A0A0C4DH39 117 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 TEX49A0A1B0GTD5 131 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 C15orf62A8K5M9 175 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 ZNF73O43830 326 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-208ENST00000514335 SSSCA1O60232 199 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 PLA2G2AP14555 144 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 NPPCP23582 126 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 FAM223AQ8IWN6 122 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 SPACA3Q8IXA5 215 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 ZNF843Q8N446 348 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 CCL17Q92583 94 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 HDHD3Q9BSH5 251 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-208ENST00000514335 COL27A1Q8IZC6 1860 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-208ENST00000514335 TMEM256-PLSCR3K7ERE1 68 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 SLC25A20O43772 301 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 LTAP01374 205 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 RNASE2P10153 161 aaKnown RBP5.52□□□□□ -1.53
NIPBL-208ENST00000514335 PCBD1P61457 104 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 HIST1H4AP62805 103 aaKnown RBP5.52□□□□□ -1.53
NIPBL-208ENST00000514335 CCL8P80075 99 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 OR5AS1Q8N127 324 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 SERP2Q8N6R1 65 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
NIPBL-208ENST00000514335 IL4P05112 153 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 RPL38P63173 70 aaKnown RBP5.51□□□□□ -1.53
NIPBL-208ENST00000514335 GFRALQ6UXV0 394 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 LINC00205P59089 165 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 TMEM243Q9BU79 118 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 SRXN1Q9BYN0 137 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 MDC1Q14676 2089 aaKnown RBP5.51□□□□□ -1.53
NIPBL-208ENST00000514335 CDH23Q9H251 3354 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 TCRBV5S1A1TA0A578 114 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 RPL30P62888 115 aaKnown RBP5.51□□□□□ -1.53
NIPBL-208ENST00000514335 MKXQ8IYA7 352 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 RITA1Q96K30 269 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 DCTN5Q9BTE1 182 aa5.51□□□□□ -1.53
NIPBL-208ENST00000514335 KLF16Q9BXK1 252 aaPredicted RBP5.51□□□□□ -1.53
NIPBL-208ENST00000514335 NACAE9PAV3 2078 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 CHD9Q3L8U1 2897 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 GP1BBP13224 206 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-208ENST00000514335 S100A3P33764 101 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 CXCL5P42830 114 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 ZNF80P51504 273 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-208ENST00000514335 B3GALT5-AS1P59052 145 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 UBE2D3P61077 147 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 UBE2D2P62837 147 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 PRNTQ86SH4 94 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 IGHV3OR15-7A0A075B7D8 119 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 UBE2L5PA0A1B0GUS4 154 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 RBMY1BA6NDE4 496 aaKnown RBP5.5□□□□□ -1.53
NIPBL-208ENST00000514335 RBMY1EA6NEQ0 496 aaKnown RBP5.5□□□□□ -1.53
NIPBL-208ENST00000514335 M0R381 172 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 RBMY1DP0C7P1 496 aaKnown RBP5.5□□□□□ -1.53
NIPBL-208ENST00000514335 RBMY1A1P0DJD3 496 aaKnown RBP5.5□□□□□ -1.53
NIPBL-208ENST00000514335 MPLKIPQ8TAP9 179 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 ARRDC1-AS1Q9H2J1 176 aa5.5□□□□□ -1.53
NIPBL-208ENST00000514335 J3QKU1 62 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 HBBP68871 147 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 GVQW1Q8N7I0 195 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 PRR25Q96S07 402 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 MGST2Q99735 147 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 TTTY13Q9BZ97 58 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 FOXQ1Q9C009 403 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 IGKV1D-13A0A0B4J2D9 117 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 LST1O00453 97 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 CST7O76096 145 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 IGKV1-13P0DP09 117 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 SPINT3P49223 89 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 SYNJ2BPP57105 145 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 C19orf54Q5BKX5 351 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 LYPD5Q6UWN5 251 aa5.49□□□□□ -1.53
NIPBL-208ENST00000514335 SPTBP11277 2137 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 TRBV20OR9-2A0A075B6H5 130 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 LOC101059948A0A1B0GTJ6 334 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 MYMXA0A1B0GTQ4 84 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 FAM72CH0Y354 149 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 LGALS3P17931 250 aaKnown RBP5.48□□□□□ -1.53
NIPBL-208ENST00000514335 FAM72AQ5TYM5 149 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 FAM72DQ6L9T8 149 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 C5orf38Q86SI9 138 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 FAM72BQ86X60 149 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 PSMG3-AS1Q96PY0 264 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 TTTY10Q9BZA0 68 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 TRBV25-1A0A075B6N4 114 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 CCKP06307 115 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 LINC00528Q8N1L1 170 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 HEATR5BQ9P2D3 2071 aa5.48□□□□□ -1.53
NIPBL-208ENST00000514335 TRANK1O15050 2925 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms