RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 PDCD6O75340 191 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 IGKCP01834 107 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 IGHV4-34P06331 123 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 DSCR4P56555 118 aaPredicted RBP2.93□□□□□ -1.94
NIPBL-207ENST00000513819 ERCC8Q13216 396 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 LGALS9BQ3B8N2 356 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 PSMG4Q5JS54 123 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 DGAT2L6Q6ZPD8 337 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 HMGN2P46Q86SG4 172 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 SLC22A24Q8N4F4 322 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 DRAM1Q8N682 238 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 RNF182Q8N6D2 247 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 LY6G5BQ8NDX9 201 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 NT5CQ8TCD5 201 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 ZNF721Q8TF20 911 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 TM2D3Q9BRN9 247 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 UPK3BQ9BT76 320 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 DPH3P1Q9H4G8 78 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 SLC39A9Q9NUM3 307 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 XCL2Q9UBD3 114 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 F11RQ9Y624 299 aaKnown RBP2.93□□□□□ -1.94
NIPBL-207ENST00000513819 DEPDC5O75140 1603 aa2.93□□□□□ -1.94
NIPBL-207ENST00000513819 MYO18AQ92614 2054 aaKnown RBP2.92□□□□□ -1.94
NIPBL-207ENST00000513819 TMEM131Q92545 1883 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 TRPM7Q96QT4 1865 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 CD163L1Q9NR16 1453 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 TRAV2A0A0B4J234 112 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 IGKV1D-13A0A0B4J2D9 117 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 MDFIC2A0A1B0GVS7 189 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 A0A1B0GXF2 115 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 H0Y9J4 135 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 SS18L1O75177 396 aaPredicted RBP2.92□□□□□ -1.94
NIPBL-207ENST00000513819 NDUFB2O95178 105 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 TCRAP04437 139 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 ASAH2BP0C7U1 165 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 IGKV1-13P0DP09 117 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 SUB1P53999 127 aaKnown RBP eCLIP2.92□□□□□ -1.94
NIPBL-207ENST00000513819 NPC2P61916 151 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 HIST1H4AP62805 103 aaKnown RBP2.92□□□□□ -1.94
NIPBL-207ENST00000513819 HBG1P69891 147 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 HBG2P69892 147 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 INSL4Q14641 139 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 RSPO1Q2MKA7 263 aaPredicted RBP2.92□□□□□ -1.94
NIPBL-207ENST00000513819 FAM78AQ5JUQ0 283 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 Q6P435 159 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 UNQ9165/PRO28630Q6UXU0 137 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 OR5AS1Q8N127 324 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 ZNF645Q8N7E2 425 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 LINC01555Q8NAE3 123 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 COPS9Q8WXC6 57 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 H1FXQ92522 213 aaKnown RBP2.92□□□□□ -1.94
NIPBL-207ENST00000513819 SMIM7Q9BQ49 75 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 PRSS27Q9BQR3 290 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 FAM60AQ9NP50 221 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 ANAPC11Q9NYG5 84 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 ARL2-SNX15V9GYD0 113 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 ZFC3H1O60293 1989 aaKnown RBP2.92□□□□□ -1.94
NIPBL-207ENST00000513819 KCPQ6ZWJ8 1503 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 ARFGEF2Q9Y6D5 1785 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 GTF3C1Q12789 2109 aa2.92□□□□□ -1.94
NIPBL-207ENST00000513819 DUOX1Q9NRD9 1551 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 IGKV6D-41A0A0C4DH26 115 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 IGHV1-24A0A0C4DH33 117 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 IGHV1-58A0A0C4DH39 117 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 A0A0D9SEW6 157 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 hADV29S1A0JD25 119 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 ATOX1O00244 68 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 SLC25A14O95258 325 aaPredicted RBP2.91□□□□□ -1.94
NIPBL-207ENST00000513819 CXCL5P42830 114 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 SSR2P43308 183 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 MRPS36P82909 103 aaKnown RBP2.91□□□□□ -1.94
NIPBL-207ENST00000513819 CST6Q15828 149 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 ZNF791Q3KP31 576 aaPredicted RBP2.91□□□□□ -1.94
NIPBL-207ENST00000513819 ZNF678Q5SXM1 525 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 LINC01545Q5VT33 79 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 C1orf140Q5VVS0 124 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 FP248Q71RG6 208 aaPredicted RBP2.91□□□□□ -1.94
NIPBL-207ENST00000513819 LINC00305Q7Z4B0 112 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 KRTAP11-1Q8IUC1 163 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 Q8N7P7 452 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 C10orf105Q8TEF2 133 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 TMEM158Q8WZ71 300 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 NMNAT3Q96T66 252 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 HDHD3Q9BSH5 251 aaPredicted RBP2.91□□□□□ -1.94
NIPBL-207ENST00000513819 DEC1Q9P2X7 70 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 CCDC88CQ9P219 2028 aa2.91□□□□□ -1.94
NIPBL-207ENST00000513819 LTBP1Q14766 1721 aa2.9□□□□□ -1.94
NIPBL-207ENST00000513819 DOCK1Q14185 1865 aa2.9□□□□□ -1.94
NIPBL-207ENST00000513819 MICAL3Q7RTP6 2002 aa2.9□□□□□ -1.94
NIPBL-207ENST00000513819 ROBO1Q9Y6N7 1651 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 TRAV8-2A0A0B4J237 113 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 TRAV8-4A0A0B4J246 113 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 TRAV17A0A0B4J275 112 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 WI2-2373I1.2A0A1W2PRP0 233 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 A6NDX4 124 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 LINC01619G3V211 115 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 J3QRE1 110 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 J3QT63 122 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 LGALS9O00182 355 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms