RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 C11orf71Q6IPW1 123 aa10.9□□□□□ -0.66
SNCAIP-217ENST00000512385 OSR1Q8TAX0 266 aaPredicted RBP10.9□□□□□ -0.66
SNCAIP-217ENST00000512385 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
SNCAIP-217ENST00000512385 IGLV2-23P01705 113 aa10.89□□□□□ -0.67
SNCAIP-217ENST00000512385 ZNF833PQ6ZTB9 187 aa10.89□□□□□ -0.67
SNCAIP-217ENST00000512385 S4R3C0 116 aa10.89□□□□□ -0.67
SNCAIP-217ENST00000512385 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
SNCAIP-217ENST00000512385 BCL6BQ8N143 479 aaPredicted RBP10.89□□□□□ -0.67
SNCAIP-217ENST00000512385 HSD52Q0P140 79 aa10.88□□□□□ -0.67
SNCAIP-217ENST00000512385 MRGPRG-AS1Q2M3A8 158 aa10.88□□□□□ -0.67
SNCAIP-217ENST00000512385 TMEM200BQ69YZ2 307 aa10.88□□□□□ -0.67
SNCAIP-217ENST00000512385 OR10X1Q8NGY0 326 aa10.88□□□□□ -0.67
SNCAIP-217ENST00000512385 WFDC12Q8WWY7 111 aa10.88□□□□□ -0.67
SNCAIP-217ENST00000512385 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNCAIP-217ENST00000512385 PSG3Q16557 428 aa10.88□□□□□ -0.67
SNCAIP-217ENST00000512385 TMEM167AQ8TBQ9 72 aa10.88□□□□□ -0.67
SNCAIP-217ENST00000512385 NCOR1P1Q9H4R4 102 aa10.88□□□□□ -0.67
SNCAIP-217ENST00000512385 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 WFDC2Q14508 124 aa10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 LYZL1Q6UWQ5 148 aa10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 STXBP6Q8NFX7 210 aa10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 OR4C13Q8NGP0 309 aa10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 ZNF414Q96IQ9 312 aa10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 PRELID3AQ96N28 172 aa10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 FABP2P12104 132 aa10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 SUB1P53999 127 aaKnown RBP eCLIP10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 ATP5IP56385 69 aaPredicted RBP10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 RIGQ13278 110 aa10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 SH2D6Q7Z4S9 175 aa10.87□□□□□ -0.67
SNCAIP-217ENST00000512385 TNFRSF13BO14836 293 aaPredicted RBP10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 C8orf46Q8TAG6 207 aa10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 SLC25A39Q9BZJ4 359 aaPredicted RBP10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 RAB1BQ9H0U4 201 aa10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 TMEM133Q9H2Q1 129 aa10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 TSSC4Q9Y5U2 329 aaPredicted RBP10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 NDUFB3O43676 98 aa10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 NPYP01303 97 aa10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 RBP4P02753 201 aa10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 AMTNQ6UX39 209 aa10.86□□□□□ -0.67
SNCAIP-217ENST00000512385 LCNL1Q6ZST4 164 aa10.85□□□□□ -0.67
SNCAIP-217ENST00000512385 IFI27L1Q96BM0 104 aa10.85□□□□□ -0.67
SNCAIP-217ENST00000512385 HIGD1AQ9Y241 93 aa10.85□□□□□ -0.67
SNCAIP-217ENST00000512385 NHP2Q9NX24 153 aaKnown RBP10.85□□□□□ -0.67
SNCAIP-217ENST00000512385 MSRB1Q9NZV6 116 aa10.85□□□□□ -0.67
SNCAIP-217ENST00000512385 CRYGCP07315 174 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 INSL3P51460 131 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 LGALS9BQ3B8N2 356 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 MRPL51Q4U2R6 128 aaKnown RBP10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 LGALS9CQ6DKI2 356 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 C16orf54Q6UWD8 224 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 PSG8Q9UQ74 426 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 ABCA2Q9BZC7 2435 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 SMIM13P0DJ93 91 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 DTX2Q86UW9 622 aa10.84□□□□□ -0.67
SNCAIP-217ENST00000512385 KRTAP10-9P60411 292 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 IGFL4Q6B9Z1 124 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 GTSCR1Q86UQ5 136 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 TRGV9Q99603 122 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 TEX15Q9BXT5 2789 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 WI2-2373I1.2A0A1W2PRP0 233 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 ETDBQ3ZM63 59 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 TMEM75Q8N9X5 138 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 OR9G4Q8NGQ1 327 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 ARPC1AQ92747 370 aa10.83□□□□□ -0.68
SNCAIP-217ENST00000512385 H3BMG7 143 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 HBDP02042 147 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 GATA1P15976 413 aaPredicted RBP10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 EVI2AP22794 236 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 ATP5G2Q06055 141 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 OR5A1Q8NGJ0 315 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 BPESC1Q9GZL8 116 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 RAB9BQ9NP90 201 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 PAX8Q06710 450 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 FAM104BQ5XKR9 115 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 ORMDL3Q8N138 153 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 OR4X2Q8NGF9 303 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 LINC00574Q9H8X3 128 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 LINC00312Q9Y6C7 94 aa10.82□□□□□ -0.68
SNCAIP-217ENST00000512385 CKS2P33552 79 aa10.81□□□□□ -0.68
SNCAIP-217ENST00000512385 Q8TAT8 98 aa10.81□□□□□ -0.68
SNCAIP-217ENST00000512385 SIGMAR1Q99720 223 aa10.81□□□□□ -0.68
SNCAIP-217ENST00000512385 INS-IGF2F8WCM5 200 aa10.81□□□□□ -0.68
SNCAIP-217ENST00000512385 IGHV4-39P01824 125 aa10.81□□□□□ -0.68
SNCAIP-217ENST00000512385 PPIFP30405 207 aaKnown RBP10.81□□□□□ -0.68
SNCAIP-217ENST00000512385 VGLL1Q99990 258 aa10.81□□□□□ -0.68
SNCAIP-217ENST00000512385 TRBV19A0A075B6N1 114 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 GAGE12HA6NDE8 117 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 COX7A1P24310 79 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 ZFP36P26651 326 aaKnown RBP10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 RPL27AP46776 148 aaKnown RBP10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 TWIST1Q15672 202 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 KLF17Q5JT82 389 aaPredicted RBP10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 SIGLEC15Q6ZMC9 328 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 TNFRSF14Q92956 283 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 CHAC1Q9BUX1 264 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 HHLA3Q9XRX5 114 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 ACANP16112 2415 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 SONP18583 2426 aaKnown RBP10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 IGKV2-40A0A087WW87 121 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms