RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 TFPI2P48307 235 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 IGFL4Q6B9Z1 124 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 SLC25A34Q6PIV7 304 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 CLEC19AQ6UXS0 136 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 FAM223AQ8IWN6 122 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 ORAOV1Q8WV07 137 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 METTL26Q96S19 204 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 SCRT2Q9NQ03 307 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 MOB4Q9Y3A3 225 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 MED13LQ71F56 2210 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 IGHV3-35A0A0C4DH35 117 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 hDV102S1A0JD36 115 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 PRB4P10163 310 aaPredicted RBP7.12□□□□□ -1.27
CPNE4-210ENST00000512332 HIST1H1AQ02539 215 aaPredicted RBP7.12□□□□□ -1.27
CPNE4-210ENST00000512332 ATP5G2Q06055 141 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 TWIST1Q15672 202 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 MEGF9Q9H1U4 602 aa7.12□□□□□ -1.27
CPNE4-210ENST00000512332 PRAC2D3DTV9 90 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 C19orf84I3L1E1 186 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 IGHV4-39P01824 125 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 ORM1P02763 201 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 CKS2P33552 79 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 HINT1P49773 126 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-210ENST00000512332 PMCHL2Q9BQD1 86 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 IGHV3OR16-8A0A075B7F1 116 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 TRAV8-2A0A0B4J237 113 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 TRAV41A0A0B4J266 112 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 IGHV1-69DA0A0B4J2H0 117 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 IGHV1-69P01742 117 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 NPSP0C0P6 89 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 LGALS9BQ3B8N2 356 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 LGALS9CQ6DKI2 356 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 C9orf47Q6ZRZ4 202 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 PIFOQ8TCI5 191 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 AGPAT4-IT1Q9H0P7 198 aa7.11□□□□□ -1.27
CPNE4-210ENST00000512332 TCF21O43680 179 aa7.1□□□□□ -1.27
CPNE4-210ENST00000512332 HBDP02042 147 aa7.1□□□□□ -1.27
CPNE4-210ENST00000512332 IGF1P05019 195 aa7.1□□□□□ -1.27
CPNE4-210ENST00000512332 ERCC8Q13216 396 aa7.1□□□□□ -1.27
CPNE4-210ENST00000512332 FAM106AQ4KMX7 169 aa7.1□□□□□ -1.27
CPNE4-210ENST00000512332 C12orf54Q6X4T0 127 aa7.1□□□□□ -1.27
CPNE4-210ENST00000512332 RNF185Q96GF1 192 aa7.1□□□□□ -1.27
CPNE4-210ENST00000512332 LENEPQ9Y5L5 61 aa7.1□□□□□ -1.27
CPNE4-210ENST00000512332 NDUFS8O00217 210 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 NPYP01303 97 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 COX8AP10176 69 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 FOSL1P15407 271 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 LOXL1Q08397 574 aaPredicted RBP7.09□□□□□ -1.27
CPNE4-210ENST00000512332 C8orf86Q6ZUL3 223 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 RNF182Q8N6D2 247 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 COX11Q9Y6N1 276 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 LOC389332A0A1B0GUA5 103 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 H3BUA1 57 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 GNLYP22749 145 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 UQCRFS1P47985 274 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 TMEM78Q5T7P6 136 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 IL17RELQ6ZVW7 336 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 DEFB125Q8N687 156 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 ZNF738Q8NE65 137 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 OR1N2Q8NGR9 330 aa7.09□□□□□ -1.27
CPNE4-210ENST00000512332 IGHV4-4A0A075B6R2 117 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 IGKV3D-20A0A0C4DH25 116 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 PSMG4Q5JS54 123 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 GLMPQ8WWB7 406 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 PIMREGQ9BSJ6 248 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 MAP1LC3AQ9H492 121 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 NXT2Q9NPJ8 142 aaKnown RBP7.08□□□□□ -1.28
CPNE4-210ENST00000512332 MUC21A0A0G2JKD1 596 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 MUC21A0A140T8X8 626 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 PRSS47A8MTI9 375 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 NDUFA4O00483 81 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 NCR2O95944 276 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 MPV17L2Q567V2 206 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 MUC21Q5SSG8 566 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 PRSS57Q6UWY2 283 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 C9orf139Q6ZV77 190 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 TMEM219Q86XT9 240 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 C10orf105Q8TEF2 133 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 USMG5Q96IX5 58 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 MCRIP2Q9BUT9 160 aaKnown RBP7.08□□□□□ -1.28
CPNE4-210ENST00000512332 MSRB1Q9NZV6 116 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 SPTBN4Q9H254 2564 aa7.08□□□□□ -1.28
CPNE4-210ENST00000512332 IGHV3-66A0A0C4DH42 116 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 H0Y8G0 127 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 TRGV3P03979 118 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 BVES-AS1Q5T3Y7 98 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 IFI27L1Q96BM0 104 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 TIMM8BQ9Y5J9 83 aaPredicted RBP7.07□□□□□ -1.28
CPNE4-210ENST00000512332 TNFRSF6BO95407 300 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 NUDT3O95989 172 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 IGHG2P01859 326 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 PPIFP30405 207 aaKnown RBP7.07□□□□□ -1.28
CPNE4-210ENST00000512332 ARL3P36405 182 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 OR8A1Q8NGG7 326 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 C11orf21Q9P2W6 132 aa7.07□□□□□ -1.28
CPNE4-210ENST00000512332 CACNA1BQ00975 2339 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 IGHV3OR16-13A0A075B7E8 117 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 IGHV3-74A0A0B4J1X5 117 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 IGHV4-61A0A0C4DH41 118 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms