RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TRAV8-3A0A0A6YYJ7 113 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 FAM240AA0A1B0GVK7 77 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 CDCP2Q5VXM1 449 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 FAM168AQ92567 244 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 Q8NFD4 153 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 SRRM4A7MD48 611 aaKnown RBP6.81□□□□□ -1.32
HTT-208ENST00000510626 RNASE6Q93091 150 aaKnown RBP6.81□□□□□ -1.32
HTT-208ENST00000510626 LMO1P25800 156 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 SS18Q15532 418 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 FAM216BQ8N7L0 139 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 GATD1Q8NB37 220 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 IGHV3OR16-12A0A075B7B8 117 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 A0A087WX48 190 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 I3L3M4 83 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 Q8TCH9 128 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 UQCRQO14949 82 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 RFPL3SP0C7P2 107 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 RPL15P61313 204 aaKnown RBP6.8□□□□□ -1.32
HTT-208ENST00000510626 IGLC7A0M8Q6 106 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 JMJD7-PLA2G4BH0Y9G9 81 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 TRAV40A0A0B4J280 105 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 IGHV1-8P0DP01 117 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 LCNL1Q6ZST4 164 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 HERVK_113P63121 156 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 FOXC1Q12948 553 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 C12orf74Q32Q52 190 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 SIGLEC9Q9Y336 463 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 SCRT1Q9BWW7 348 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 LTAP01374 205 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 IGKV1-27A0A075B6S5 117 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 TRAV12-1A0A0B4J245 112 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 IGKV3-15P01624 115 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 PRSS22Q9GZN4 317 aa6.8□□□□□ -1.32
HTT-208ENST00000510626 C15orf53Q8NAA6 179 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 IGLL1P15814 213 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 TRBV19A0A075B6N1 114 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 CCL3L1P16619 93 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 ZNF71Q9NQZ8 489 aaPredicted RBP6.79□□□□□ -1.32
HTT-208ENST00000510626 EXPH5Q8NEV8 1989 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 SPACA3Q8IXA5 215 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 KNCNA6PVL3 124 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 Q6Q795 121 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 ZFP36L1Q07352 338 aaKnown RBP6.79□□□□□ -1.32
HTT-208ENST00000510626 PRIMA1Q86XR5 153 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 TMEM219Q86XT9 240 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 EXOC3-AS1Q8N2X6 119 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.79□□□□□ -1.32
HTT-208ENST00000510626 SPINK2P20155 84 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 PKD1L2Q7Z442 2459 aa6.79□□□□□ -1.32
HTT-208ENST00000510626 ITLN2Q8WWU7 325 aaPredicted RBP6.78□□□□□ -1.32
HTT-208ENST00000510626 THBDP07204 575 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 SMIM2Q9BVW6 85 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 IGHV1-3A0A0C4DH29 117 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 LSM4Q9Y4Z0 139 aaKnown RBP6.78□□□□□ -1.32
HTT-208ENST00000510626 IGKV2-40A0A087WW87 121 aaPredicted RBP6.78□□□□□ -1.32
HTT-208ENST00000510626 TRAV41A0A0B4J266 112 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 J3QQQ9 107 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 IGKV2D-40P01614 121 aaPredicted RBP6.78□□□□□ -1.32
HTT-208ENST00000510626 DSCAMO60469 2012 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 THAP8Q8NA92 274 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 DAZ1Q9NQZ3 744 aaKnown RBP6.78□□□□□ -1.32
HTT-208ENST00000510626 C14orf178Q8N769 122 aaPredicted RBP6.78□□□□□ -1.32
HTT-208ENST00000510626 PIFOQ8TCI5 191 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 SCRT2Q9NQ03 307 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 COL11A2P13942 1736 aaPredicted RBP6.78□□□□□ -1.32
HTT-208ENST00000510626 FGF6P10767 208 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 NDUFA4L2Q9NRX3 87 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 SETD2Q9BYW2 2564 aaPredicted RBP6.78□□□□□ -1.32
HTT-208ENST00000510626 CXCL5P42830 114 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 RCHY1Q96PM5 261 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 CHCHD5Q9BSY4 110 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 C9JQL5 133 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 TMEM178BH3BS89 294 aa6.78□□□□□ -1.32
HTT-208ENST00000510626 CCL25O15444 150 aa6.77□□□□□ -1.32
HTT-208ENST00000510626 CFHR2P36980 270 aa6.77□□□□□ -1.32
HTT-208ENST00000510626 GATA3P23771 443 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 IGHG2P01859 326 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 ZNF114Q8NC26 417 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 CELA3BP08861 270 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 TGFBR3LH3BV60 316 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 NDUFA12Q9UI09 145 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 TLN1Q9Y490 2541 aaKnown RBP6.77□□□□□ -1.33
HTT-208ENST00000510626 NDUFS7O75251 213 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 PLAURQ03405 335 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 BMPERQ8N8U9 685 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 KIAA1549LQ6ZVL6 1849 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 NOTCH4Q99466 2003 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 K7EM74 188 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 LINC00473A8K010 186 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 C2orf66Q6UXQ4 117 aa6.77□□□□□ -1.33
HTT-208ENST00000510626 IGHV3OR16-13A0A075B7E8 117 aa6.76□□□□□ -1.33
HTT-208ENST00000510626 IGHV3-74A0A0B4J1X5 117 aa6.76□□□□□ -1.33
HTT-208ENST00000510626 F6UB75 175 aa6.76□□□□□ -1.33
HTT-208ENST00000510626 COLCA1Q6ZS62 124 aa6.76□□□□□ -1.33
HTT-208ENST00000510626 SSC4DQ8WTU2 575 aa6.76□□□□□ -1.33
HTT-208ENST00000510626 TMEM200BQ69YZ2 307 aa6.76□□□□□ -1.33
HTT-208ENST00000510626 STPG1Q5TH74 334 aa6.76□□□□□ -1.33
HTT-208ENST00000510626 LINC00311Q8N616 119 aa6.76□□□□□ -1.33
HTT-208ENST00000510626 ZNF747Q9BV97 191 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms