RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 LINC00612Q8N6U2 182 aa16.12■□□□□ 0.17
SNF8-209ENST00000510558 FXYD5Q96DB9 178 aa16.12■□□□□ 0.17
SNF8-209ENST00000510558 FAM19A4Q96LR4 140 aa16.12■□□□□ 0.17
SNF8-209ENST00000510558 MBD2Q9UBB5 411 aa16.12■□□□□ 0.17
SNF8-209ENST00000510558 IGKV2-40A0A087WW87 121 aaPredicted RBP16.11■□□□□ 0.17
SNF8-209ENST00000510558 C7orf71A4D174 169 aa16.11■□□□□ 0.17
SNF8-209ENST00000510558 KLLNB2CW77 178 aa16.11■□□□□ 0.17
SNF8-209ENST00000510558 IGKV2D-40P01614 121 aaPredicted RBP16.11■□□□□ 0.17
SNF8-209ENST00000510558 C9orf47Q6ZRZ4 202 aa16.11■□□□□ 0.17
SNF8-209ENST00000510558 RNF141Q8WVD5 230 aa16.11■□□□□ 0.17
SNF8-209ENST00000510558 SMIM3Q9BZL3 60 aa16.11■□□□□ 0.17
SNF8-209ENST00000510558 RTL8CO15255 209 aa16.1■□□□□ 0.17
SNF8-209ENST00000510558 NUDT3O95989 172 aa16.1■□□□□ 0.17
SNF8-209ENST00000510558 BTN1A1Q13410 526 aa16.1■□□□□ 0.17
SNF8-209ENST00000510558 FFAR4Q5NUL3 377 aa16.1■□□□□ 0.17
SNF8-209ENST00000510558 Q6ZR54 194 aa16.1■□□□□ 0.17
SNF8-209ENST00000510558 PHYHIPLQ96FC7 376 aa16.1■□□□□ 0.17
SNF8-209ENST00000510558 ATG101Q9BSB4 218 aa16.1■□□□□ 0.17
SNF8-209ENST00000510558 DNAH2Q9P225 4427 aa16.1■□□□□ 0.17
SNF8-209ENST00000510558 OR7C2O60412 319 aa16.09■□□□□ 0.17
SNF8-209ENST00000510558 IFNA5P01569 189 aa16.09■□□□□ 0.17
SNF8-209ENST00000510558 FAM3BP58499 235 aaPredicted RBP16.09■□□□□ 0.17
SNF8-209ENST00000510558 CD300CQ08708 224 aa16.09■□□□□ 0.17
SNF8-209ENST00000510558 SCGB1C1Q8TD33 95 aa16.09■□□□□ 0.17
SNF8-209ENST00000510558 GAGE12BA1L429 117 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 ZNF324O75467 553 aaPredicted RBP16.08■□□□□ 0.16
SNF8-209ENST00000510558 GAGE7O76087 117 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 GAGE12FP0CL80 117 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 GAGE12GP0CL81 117 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 GAGE12IP0CL82 117 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 CRISP2P16562 243 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 TMEM78Q5T7P6 136 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 ZNF503Q96F45 646 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 VGLL1Q99990 258 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 FAT2Q9NYQ8 4349 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 DNAH17Q9UFH2 4485 aa16.08■□□□□ 0.16
SNF8-209ENST00000510558 RNASE4P34096 147 aaKnown RBP16.07■□□□□ 0.16
SNF8-209ENST00000510558 DAZ2Q13117 558 aaKnown RBP16.07■□□□□ 0.16
SNF8-209ENST00000510558 ALG5Q9Y673 324 aa16.07■□□□□ 0.16
SNF8-209ENST00000510558 PRSS29PA6NIE9 313 aa16.06■□□□□ 0.16
SNF8-209ENST00000510558 GPX1P07203 203 aa16.06■□□□□ 0.16
SNF8-209ENST00000510558 NMBP08949 121 aa16.06■□□□□ 0.16
SNF8-209ENST00000510558 UBE2L3P68036 154 aaKnown RBP16.06■□□□□ 0.16
SNF8-209ENST00000510558 OR5I1Q13606 314 aa16.06■□□□□ 0.16
SNF8-209ENST00000510558 ZFAND2AQ8N6M9 145 aa16.06■□□□□ 0.16
SNF8-209ENST00000510558 ZNF680Q8NEM1 530 aa16.06■□□□□ 0.16
SNF8-209ENST00000510558 LINC00467Q9BRT7 94 aa16.06■□□□□ 0.16
SNF8-209ENST00000510558 A0A1B0GVY2 172 aa16.05■□□□□ 0.16
SNF8-209ENST00000510558 KHDC3LQ587J8 217 aa16.05■□□□□ 0.16
SNF8-209ENST00000510558 EIF4E3Q8N5X7 224 aaKnown RBP16.05■□□□□ 0.16
SNF8-209ENST00000510558 WFDC1Q9HC57 220 aa16.05■□□□□ 0.16
SNF8-209ENST00000510558 GSN-AS1Q9NRJ2 163 aa16.05■□□□□ 0.16
SNF8-209ENST00000510558 ZNF492Q9P255 531 aa16.05■□□□□ 0.16
SNF8-209ENST00000510558 TAS2R45P59539 299 aa16.04■□□□□ 0.16
SNF8-209ENST00000510558 RANP62826 216 aaKnown RBP16.04■□□□□ 0.16
SNF8-209ENST00000510558 ANXA2RQ3ZCQ2 193 aa16.04■□□□□ 0.16
SNF8-209ENST00000510558 PRR9Q5T870 116 aa16.04■□□□□ 0.16
SNF8-209ENST00000510558 Q6ZTI0 123 aa16.04■□□□□ 0.16
SNF8-209ENST00000510558 LYPD1Q8N2G4 141 aa16.04■□□□□ 0.16
SNF8-209ENST00000510558 C11orf72Q8NBR9 251 aa16.04■□□□□ 0.16
SNF8-209ENST00000510558 Q9H3A6 140 aa16.04■□□□□ 0.16
SNF8-209ENST00000510558 TRAV26-1A0A087WT03 109 aa16.03■□□□□ 0.16
SNF8-209ENST00000510558 M6PRP20645 277 aa16.03■□□□□ 0.16
SNF8-209ENST00000510558 HOXA5P20719 270 aa16.03■□□□□ 0.16
SNF8-209ENST00000510558 CSN1S1P47710 185 aa16.03■□□□□ 0.16
SNF8-209ENST00000510558 ZNF138P52744 262 aa16.03■□□□□ 0.16
SNF8-209ENST00000510558 CCL18P55774 89 aa16.03■□□□□ 0.16
SNF8-209ENST00000510558 Q8TAT8 98 aa16.03■□□□□ 0.16
SNF8-209ENST00000510558 GNPNAT1Q96EK6 184 aaPredicted RBP16.03■□□□□ 0.16
SNF8-209ENST00000510558 PTTG1O95997 202 aa16.02■□□□□ 0.16
SNF8-209ENST00000510558 ZNRF2Q8NHG8 242 aa16.02■□□□□ 0.16
SNF8-209ENST00000510558 TMPRSS5Q9H3S3 457 aa16.02■□□□□ 0.16
SNF8-209ENST00000510558 A0A0J9YY99 117 aa16.01■□□□□ 0.15
SNF8-209ENST00000510558 RBAKDNA6NC62 111 aa16.01■□□□□ 0.15
SNF8-209ENST00000510558 RGS13O14921 159 aa16.01■□□□□ 0.15
SNF8-209ENST00000510558 EIF3GO75821 320 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNF8-209ENST00000510558 SOHLH1Q5JUK2 328 aa16.01■□□□□ 0.15
SNF8-209ENST00000510558 RXFP4Q8TDU9 374 aa16.01■□□□□ 0.15
SNF8-209ENST00000510558 LINC00588Q9Y4M8 146 aa16.01■□□□□ 0.15
SNF8-209ENST00000510558 TRBV7-9A0A0J9YWB2 115 aa16■□□□□ 0.15
SNF8-209ENST00000510558 ACOT6Q3I5F7 207 aaPredicted RBP16■□□□□ 0.15
SNF8-209ENST00000510558 C1orf134Q5TEV5 83 aa16■□□□□ 0.15
SNF8-209ENST00000510558 Q6ZQT7 251 aa16■□□□□ 0.15
SNF8-209ENST00000510558 KLF12Q9Y4X4 402 aa16■□□□□ 0.15
SNF8-209ENST00000510558 TRGV2A0A075B6R0 118 aa15.99■□□□□ 0.15
SNF8-209ENST00000510558 IGHV1OR15-1A0A075B7D0 117 aa15.99■□□□□ 0.15
SNF8-209ENST00000510558 TRGV1A0A0A0MS02 117 aa15.99■□□□□ 0.15
SNF8-209ENST00000510558 TCL1AP56279 114 aa15.99■□□□□ 0.15
SNF8-209ENST00000510558 IBA57Q5T440 356 aaKnown RBP15.99■□□□□ 0.15
SNF8-209ENST00000510558 SSX7Q7RTT5 188 aa15.99■□□□□ 0.15
SNF8-209ENST00000510558 TP53TG3Q9ULZ0 132 aa15.99■□□□□ 0.15
SNF8-209ENST00000510558 RAB2AP61019 212 aa15.98■□□□□ 0.15
SNF8-209ENST00000510558 C18orf15Q96N68 181 aa15.98■□□□□ 0.15
SNF8-209ENST00000510558 MED28Q9H204 178 aa15.98■□□□□ 0.15
SNF8-209ENST00000510558 MUC4Q99102 2169 aa15.97■□□□□ 0.15
SNF8-209ENST00000510558 NBDYA0A0U1RRE5 68 aa15.97■□□□□ 0.15
SNF8-209ENST00000510558 A0A1W2PPV4 95 aa15.97■□□□□ 0.15
SNF8-209ENST00000510558 DIRC3C9JPN6 131 aa15.97■□□□□ 0.15
SNF8-209ENST00000510558 H3BNG1 76 aa15.97■□□□□ 0.15
SNF8-209ENST00000510558 SPINK4O60575 86 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms