RNA–Protein interactions for RNA: ENST00000510241.5

APBB3-215, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-215	ENST00000510241	CSMD2	Q7Z408	3487 aa		12.52	□□□□□ -0.4
APBB3-215	ENST00000510241	MC5R	P33032	325 aa		12.52	□□□□□ -0.41
APBB3-215	ENST00000510241	RPS20	P60866	119 aa	Known RBP	12.52	□□□□□ -0.41
APBB3-215	ENST00000510241	TMEM108	Q6UXF1	575 aa		12.52	□□□□□ -0.41
APBB3-215	ENST00000510241	ARPC1A	Q92747	370 aa		12.52	□□□□□ -0.41
APBB3-215	ENST00000510241	TRAV40	A0A0B4J280	105 aa		12.52	□□□□□ -0.41
APBB3-215	ENST00000510241	PRAC2	D3DTV9	90 aa		12.52	□□□□□ -0.41
APBB3-215	ENST00000510241	LGALS9B	Q3B8N2	356 aa		12.52	□□□□□ -0.41
APBB3-215	ENST00000510241	ETDB	Q3ZM63	59 aa		12.52	□□□□□ -0.41
APBB3-215	ENST00000510241	ZC2HC1B	Q5TFG8	222 aa		12.52	□□□□□ -0.41
APBB3-215	ENST00000510241	LGALS9C	Q6DKI2	356 aa		12.52	□□□□□ -0.41
APBB3-215	ENST00000510241		K7EQM0	130 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	THBD	P07204	575 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	ZNF883	P0CG24	379 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	SMIM13	P0DJ93	91 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	HOXB4	P17483	251 aa	Predicted RBP	12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	ZNF575	Q86XF7	245 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	ONECUT1	Q9UBC0	465 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	CRYBG3	Q68DQ2	2970 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	CRYGB	P07316	175 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	GFRAL	Q6UXV0	394 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241	CHAC1	Q9BUX1	264 aa		12.51	□□□□□ -0.41
APBB3-215	ENST00000510241		H3BRN7	92 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	ZNF562	Q6V9R5	426 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	BUB1B-PAK6	H3BSN5	160 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	NDUFA3	O95167	84 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	TRGV3	P03979	118 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	EFNA4	P52798	201 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	ATP5G2	Q06055	141 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	PAX8	Q06710	450 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	SAMD13	Q5VXD3	122 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	FAM169B	Q8N8A8	192 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	TMEM158	Q8WZ71	300 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	HHLA3	Q9XRX5	114 aa		12.5	□□□□□ -0.41
APBB3-215	ENST00000510241	TRBV25-1	A0A075B6N4	114 aa		12.49	□□□□□ -0.41
APBB3-215	ENST00000510241		A0A0G2JNJ9	132 aa		12.49	□□□□□ -0.41
APBB3-215	ENST00000510241	TMEM8B	A6NDV4	472 aa		12.49	□□□□□ -0.41
APBB3-215	ENST00000510241	AAMDC	Q9H7C9	122 aa		12.49	□□□□□ -0.41
APBB3-215	ENST00000510241		Q9UFV3	132 aa		12.49	□□□□□ -0.41
APBB3-215	ENST00000510241	C19orf67	A6NJJ6	358 aa		12.48	□□□□□ -0.41
APBB3-215	ENST00000510241	MRPS12	O15235	138 aa	Known RBP	12.48	□□□□□ -0.41
APBB3-215	ENST00000510241	RBPJ	Q06330	500 aa		12.48	□□□□□ -0.41
APBB3-215	ENST00000510241	DEFB123	Q8N688	67 aa		12.48	□□□□□ -0.41
APBB3-215	ENST00000510241	RNASE6	Q93091	150 aa	Known RBP	12.48	□□□□□ -0.41
APBB3-215	ENST00000510241	ODF1	Q14990	250 aa		12.48	□□□□□ -0.41
APBB3-215	ENST00000510241	PRR25	Q96S07	402 aa		12.48	□□□□□ -0.41
APBB3-215	ENST00000510241	TMEM14C	Q9P0S9	112 aa		12.48	□□□□□ -0.41
APBB3-215	ENST00000510241	IGF2R	P11717	2491 aa		12.48	□□□□□ -0.41
APBB3-215	ENST00000510241	NCBP2L	A6PVI3	153 aa	Known RBP	12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	PLA2G2C	Q5R387	149 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	RNF185	Q96GF1	192 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	MRPL35	Q9NZE8	188 aa	Known RBP	12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	UFC1	Q9Y3C8	167 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	SORL1	Q92673	2214 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	SPG11	Q96JI7	2443 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	IGLV1-47	P01700	117 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	TNFRSF6B	O95407	300 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	FTH1P19	P0C7X4	201 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	NDP	Q00604	133 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	ZNF493	Q6ZR52	646 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	OR9G4	Q8NGQ1	327 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	CLUHP3	Q96NS8	147 aa		12.47	□□□□□ -0.41
APBB3-215	ENST00000510241	PRRG2	O14669	202 aa		12.46	□□□□□ -0.41
APBB3-215	ENST00000510241	IGFL2	Q6UWQ7	119 aa		12.46	□□□□□ -0.41
APBB3-215	ENST00000510241	DYNAP	Q8N1N2	210 aa		12.46	□□□□□ -0.41
APBB3-215	ENST00000510241	DEFB1	P60022	68 aa		12.46	□□□□□ -0.42
APBB3-215	ENST00000510241	LINC00311	Q8N616	119 aa		12.46	□□□□□ -0.42
APBB3-215	ENST00000510241	OR4X2	Q8NGF9	303 aa		12.46	□□□□□ -0.42
APBB3-215	ENST00000510241		E7EQL1	145 aa		12.45	□□□□□ -0.42
APBB3-215	ENST00000510241	IL17REL	Q6ZVW7	336 aa		12.45	□□□□□ -0.42
APBB3-215	ENST00000510241	CREBBP	Q92793	2442 aa		12.45	□□□□□ -0.42
APBB3-215	ENST00000510241	IGHG4	P01861	327 aa		12.45	□□□□□ -0.42
APBB3-215	ENST00000510241	PRO3102	Q9H379	93 aa		12.45	□□□□□ -0.42
APBB3-215	ENST00000510241	SMAD5-AS1	Q9Y6J3	95 aa		12.45	□□□□□ -0.42
APBB3-215	ENST00000510241		U3KQK5	164 aa		12.45	□□□□□ -0.42
APBB3-215	ENST00000510241	TNFRSF13B	O14836	293 aa	Predicted RBP	12.44	□□□□□ -0.42
APBB3-215	ENST00000510241	TGFA	P01135	160 aa		12.44	□□□□□ -0.42
APBB3-215	ENST00000510241	PRR30	Q53SZ7	412 aa	Predicted RBP	12.44	□□□□□ -0.42
APBB3-215	ENST00000510241	C11orf21	Q9P2W6	132 aa		12.44	□□□□□ -0.42
APBB3-215	ENST00000510241	IGKC	P01834	107 aa		12.43	□□□□□ -0.42
APBB3-215	ENST00000510241	DTX2	Q86UW9	622 aa		12.43	□□□□□ -0.42
APBB3-215	ENST00000510241	CFHR4	Q92496	578 aa		12.43	□□□□□ -0.42
APBB3-215	ENST00000510241	MAP1LC3A	Q9H492	121 aa		12.43	□□□□□ -0.42
APBB3-215	ENST00000510241	LINC01548	A6NM66	108 aa		12.43	□□□□□ -0.42
APBB3-215	ENST00000510241		F8W735	103 aa	Predicted RBP	12.43	□□□□□ -0.42
APBB3-215	ENST00000510241	PVRIG	Q6DKI7	326 aa		12.43	□□□□□ -0.42
APBB3-215	ENST00000510241	PHLDA1	Q8WV24	401 aa	Predicted RBP	12.43	□□□□□ -0.42
APBB3-215	ENST00000510241	FANCD2OS	Q96PS1	177 aa		12.43	□□□□□ -0.42
APBB3-215	ENST00000510241	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.43	□□□□□ -0.42
APBB3-215	ENST00000510241	SMIM17	P0DL12	118 aa		12.42	□□□□□ -0.42
APBB3-215	ENST00000510241	EMP1	P54849	157 aa		12.42	□□□□□ -0.42
APBB3-215	ENST00000510241	TMEM30B	Q3MIR4	351 aa		12.42	□□□□□ -0.42
APBB3-215	ENST00000510241	LINC01560	Q8TB33	94 aa		12.42	□□□□□ -0.42
APBB3-215	ENST00000510241	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
APBB3-215	ENST00000510241	SPAG8	Q99932	426 aa	Predicted RBP	12.42	□□□□□ -0.42
APBB3-215	ENST00000510241	IGF1	P05019	195 aa		12.41	□□□□□ -0.42
APBB3-215	ENST00000510241	GRN	P28799	593 aa	Known RBP	12.41	□□□□□ -0.42
APBB3-215	ENST00000510241	NUP37	Q8NFH4	326 aa		12.41	□□□□□ -0.42
APBB3-215	ENST00000510241	OR5A1	Q8NGJ0	315 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms