RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SCN5AQ14524 2016 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 SCN2AQ99250 2005 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 IGKV1D-43A0A0B4J1Z2 117 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 MDFIC2A0A1B0GVS7 189 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 HLA-DQA1P01909 254 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 HBDP02042 147 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 COX8AP10176 69 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 PIPP12273 146 aaPredicted RBP3.36□□□□□ -1.87
NIPBL-206ENST00000509429 S100A3P33764 101 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 KRTAP10-1P60331 282 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 FUT5Q11128 374 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 TMEM155Q4W5P6 130 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 RPS27LQ71UM5 84 aaKnown RBP3.36□□□□□ -1.87
NIPBL-206ENST00000509429 FAM57AQ8TBR7 257 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 FGF13Q92913 245 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 ABHD14BQ96IU4 210 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 MGST2Q99735 147 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 UPK3BQ9BT76 320 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 RNF126Q9BV68 326 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF286AQ9HBT8 521 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 TP73-AS1Q9UF72 201 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 MOB4Q9Y3A3 225 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 TRAPPC1Q9Y5R8 145 aa3.36□□□□□ -1.87
NIPBL-206ENST00000509429 KIF26AQ9ULI4 1882 aaPredicted RBP3.36□□□□□ -1.87
NIPBL-206ENST00000509429 DYSFO75923 2080 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 TRPM7Q96QT4 1865 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 TRAV2A0A0B4J234 112 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 IGHV1-69DA0A0B4J2H0 117 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 A0A0G2JRQ6 117 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 A0A0J9YXV3 536 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 TMEM256-PLSCR3K7ERE1 68 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 IGLV3-27P01718 113 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 INAFM2P0DMQ5 153 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 GNLYP22749 145 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 MFAP2P55001 183 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 MLF2Q15773 248 aaPredicted RBP3.35□□□□□ -1.87
NIPBL-206ENST00000509429 MRGPRG-AS1Q2M3A8 158 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 FBXL19-AS1Q494R0 122 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 MIC13Q5XKP0 118 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 C11orf71Q6IPW1 123 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 C2orf91Q6ZV80 131 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 HMGN2P46Q86SG4 172 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.35□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF491Q8N8L2 437 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 ODF3Q96PU9 254 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 OR8B2Q96RD0 313 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 TP53TG3Q9ULZ0 132 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 Q9Y3F1 56 aa3.35□□□□□ -1.87
NIPBL-206ENST00000509429 C2orf16Q68DN1 1984 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 COL4A6Q14031 1691 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 TRAV17A0A0B4J275 112 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 CCL22O00626 93 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 ATP6V0E1O15342 81 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 SERF1AO75920 110 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 NXPH4O95158 308 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 SCGB1C2P0DMR2 95 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 PTHLHP12272 177 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 DAPP51397 102 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF136P52737 540 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 RPL23P62829 140 aaKnown RBP3.34□□□□□ -1.87
NIPBL-206ENST00000509429 CXCL6P80162 114 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 RSPO1Q2MKA7 263 aaPredicted RBP3.34□□□□□ -1.87
NIPBL-206ENST00000509429 KRTAP24-1Q3LI83 254 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 PSMG4Q5JS54 123 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 EBLN2Q6P2I7 272 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 GPHB5Q86YW7 130 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF843Q8N446 348 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 ZNRF1Q8ND25 227 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 TSKUQ8WUA8 353 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 GEMIN6Q8WXD5 167 aaKnown RBP3.34□□□□□ -1.87
NIPBL-206ENST00000509429 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 OPRPNQ99935 248 aaPredicted RBP3.34□□□□□ -1.87
NIPBL-206ENST00000509429 CLEC7AQ9BXN2 247 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 PARP12Q9H0J9 701 aaKnown RBP3.34□□□□□ -1.87
NIPBL-206ENST00000509429 CXCL16Q9H2A7 254 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 PLXNA4Q9HCM2 1894 aa3.34□□□□□ -1.87
NIPBL-206ENST00000509429 DOCK8Q8NF50 2099 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 IGHV3OR16-13A0A075B7E8 117 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 CXorf51AA0A1B0GTR3 108 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 UBE2L5PA0A1B0GUS4 154 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 SLC25A14O95258 325 aaPredicted RBP3.33□□□□□ -1.88
NIPBL-206ENST00000509429 ASAH2BP0C7U1 165 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 PLA2G2AP14555 144 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 ELK1P19419 428 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 MDKP21741 143 aaPredicted RBP3.33□□□□□ -1.88
NIPBL-206ENST00000509429 FCGR2CP31995 323 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 NCBP2P52298 156 aaKnown RBP eCLIP3.33□□□□□ -1.88
NIPBL-206ENST00000509429 ZNF138P52744 262 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 CRYBA2P53672 197 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 HIST1H4AP62805 103 aaKnown RBP3.33□□□□□ -1.88
NIPBL-206ENST00000509429 UBE2L3P68036 154 aaKnown RBP3.33□□□□□ -1.88
NIPBL-206ENST00000509429 CYCSP99999 105 aaKnown RBP3.33□□□□□ -1.88
NIPBL-206ENST00000509429 ZNF876PQ49A33 203 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 Q6ZSV7 163 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 C5orf38Q86SI9 138 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 BAGE3Q86Y29 109 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 BAGE2Q86Y30 109 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 SERP2Q8N6R1 65 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 SLC25A22Q9H936 323 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms