RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 GRIN2AQ12879 1464 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 MBD5Q9P267 1494 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 KDM6AO15550 1401 aaPredicted RBP1□□□□□ -2.25
XRCC4-204ENST00000509268 KIAA1107Q9UPP5 1409 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 TMEM2Q9UHN6 1383 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 SMARCA4P51532 1647 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 RP1P56715 2156 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 IGKV1D-17A0A075B6S4 117 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 A0A0G2JMM0 328 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 A0A1W2PPB8 328 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 hDV103S1A0JD37 113 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 KIR3DP1A8MWS1 328 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 C17orf112F2Z3M2 114 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 CORTO00230 105 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 LYRM1O43325 122 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 BAALC-AS2P0C853 105 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 RPL26P61254 145 aaKnown RBP1□□□□□ -2.25
XRCC4-204ENST00000509268 IZUMO2Q6UXV1 221 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 LINC00269Q8N2A0 174 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 FAM19A2Q8N3H0 131 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 TCTEX1D1Q8N7M0 179 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 ZNF436-AS1Q8NC38 126 aaPredicted RBP1□□□□□ -2.25
XRCC4-204ENST00000509268 TIMM21Q9BVV7 248 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 SLC35B3Q9H1N7 401 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 C14orf132Q9NPU4 83 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 METTL1Q9UBP6 276 aaKnown RBP1□□□□□ -2.25
XRCC4-204ENST00000509268 RPL26L1Q9UNX3 145 aaKnown RBP1□□□□□ -2.25
XRCC4-204ENST00000509268 ZSWIM8A7E2V4 1837 aa1□□□□□ -2.25
XRCC4-204ENST00000509268 ADGRB3O60242 1522 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 HEATR5BQ9P2D3 2071 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 STRCQ7RTU9 1775 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 NALCNQ8IZF0 1738 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 FGD6Q6ZV73 1430 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 RIMS1Q86UR5 1692 aaKnown RBP0.99□□□□□ -2.25
XRCC4-204ENST00000509268 KDM5CP41229 1560 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 MICAL3Q7RTP6 2002 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 KDM5BQ9UGL1 1544 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 SHROOM3Q8TF72 1996 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 TRBV20-1A0A075B6N2 111 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 A0A087WSZ3 146 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 TRAV12-1A0A0B4J245 112 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 LOC107986453A0A1B0GWG9 222 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 C2orf70A6NJV1 201 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 E7EQL1 145 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 E7EUB6 86 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 CCDC179H3BU77 68 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 CDC42EP2O14613 210 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 TRACP01848 142 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 APODP05090 189 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 SAA1P0DJI8 122 aaPredicted RBP0.99□□□□□ -2.25
XRCC4-204ENST00000509268 HIST1H1BP16401 226 aaKnown RBP0.99□□□□□ -2.25
XRCC4-204ENST00000509268 DSCR4P56555 118 aaPredicted RBP0.99□□□□□ -2.25
XRCC4-204ENST00000509268 CDK6Q00534 326 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 MEIG1Q5JSS6 88 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 OR5AS1Q8N127 324 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 C10orf111Q8N326 155 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 LINC00304Q8N9R0 145 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 OTOSQ8NHW6 89 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 TCEAL7Q9BRU2 100 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 SOX21Q9Y651 276 aaPredicted RBP0.99□□□□□ -2.25
XRCC4-204ENST00000509268 UHRF1BP1LA0JNW5 1464 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 PLXNA3P51805 1871 aa0.99□□□□□ -2.25
XRCC4-204ENST00000509268 GLI3P10071 1580 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 KIAA1549Q9HCM3 1950 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 BCL9LQ86UU0 1499 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 LOC107984156A0A0G2JMH3 177 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 PROSCO94903 275 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 IGKV1-17P01599 117 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 PYYP10082 97 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 RNASE2P10153 161 aaKnown RBP0.98□□□□□ -2.25
XRCC4-204ENST00000509268 CKS2P33552 79 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 GUCA1AP43080 201 aaPredicted RBP0.98□□□□□ -2.25
XRCC4-204ENST00000509268 RBP2P50120 134 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 KRTAP12-3P60328 96 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 PCBD1P61457 104 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 LSM3P62310 102 aaKnown RBP0.98□□□□□ -2.25
XRCC4-204ENST00000509268 CIRBPQ14011 172 aaKnown RBP0.98□□□□□ -2.25
XRCC4-204ENST00000509268 Q1T7F1 81 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 MIC13Q5XKP0 118 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 ARPINQ7Z6K5 226 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 ARL17AQ8IVW1 177 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 LINC00471Q8N535 108 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 OR5AK2Q8NH90 309 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 Q8TAT8 98 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 PP6455Q8WZ26 134 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 MUCL1Q96DR8 90 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 TVP23CQ96ET8 276 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 CIB3Q96Q77 187 aaPredicted RBP0.98□□□□□ -2.25
XRCC4-204ENST00000509268 CST11Q9H112 138 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 CST9LQ9H4G1 147 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 CCDC167Q9P0B6 97 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 BOKQ9UMX3 212 aaPredicted RBP0.98□□□□□ -2.25
XRCC4-204ENST00000509268 CHCHD2Q9Y6H1 151 aaPredicted RBP0.98□□□□□ -2.25
XRCC4-204ENST00000509268 COL1A2P08123 1366 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 MYH6P13533 1939 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 CCNB3Q8WWL7 1395 aa0.98□□□□□ -2.25
XRCC4-204ENST00000509268 MYO9BQ13459 2157 aa0.97□□□□□ -2.25
XRCC4-204ENST00000509268 TRAV10A0A0B4J240 114 aa0.97□□□□□ -2.25
XRCC4-204ENST00000509268 IGKV2-24A0A0C4DH68 120 aa0.97□□□□□ -2.25
XRCC4-204ENST00000509268 TCRBV4S1A1TA0A5B7 111 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms