RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 C10orf25Q5T742 122 aa5.86□□□□□ -1.47
COL4A3BP-206ENST00000508809 LCN15Q6UWW0 184 aa5.86□□□□□ -1.47
COL4A3BP-206ENST00000508809 CCDC190Q86UF4 302 aa5.86□□□□□ -1.47
COL4A3BP-206ENST00000508809 Q8N9P0 234 aaPredicted RBP5.86□□□□□ -1.47
COL4A3BP-206ENST00000508809 ZNF431Q8TF32 576 aaPredicted RBP5.86□□□□□ -1.47
COL4A3BP-206ENST00000508809 ARV1Q9H2C2 271 aa5.86□□□□□ -1.47
COL4A3BP-206ENST00000508809 NPVFQ9HCQ7 196 aa5.86□□□□□ -1.47
COL4A3BP-206ENST00000508809 PTTG2Q9NZH5 202 aa5.86□□□□□ -1.47
COL4A3BP-206ENST00000508809 FAT3Q8TDW7 4589 aa5.86□□□□□ -1.47
COL4A3BP-206ENST00000508809 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 LRP1Q07954 4544 aaKnown RBP5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 H3BP45 60 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 HOXB5P09067 269 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 CT45A10P0DMU9 189 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 PRB4P10163 310 aaPredicted RBP5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 KRTAP10-1P60331 282 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 POLR2GP62487 172 aaKnown RBP eCLIP5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 Q5VSD8 79 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 TMEM14EPQ6UXP3 125 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 Q6ZTI0 123 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 TMED4Q7Z7H5 227 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 DYNC2LI1Q8TCX1 351 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 FRZBQ92765 325 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 SAT2Q96F10 170 aaPredicted RBP5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 SMIM8Q96KF7 97 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 ODF3Q96PU9 254 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 SLC25A21Q9BQT8 299 aaPredicted RBP5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 PYGO2Q9BRQ0 406 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 SLC50A1Q9BRV3 221 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 PARD6GQ9BYG4 376 aaPredicted RBP5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 ARL6Q9H0F7 186 aa5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 CCDC59Q9P031 241 aaKnown RBP5.85□□□□□ -1.47
COL4A3BP-206ENST00000508809 SMCO3A2RU48 225 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 FABP12A6NFH5 140 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 ANXA7P20073 488 aaKnown RBP5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 TNFSF8P32971 234 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 FAUP35544 74 aaKnown RBP5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 ERVFC1-1P60608 527 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 PPP1R1AQ13522 171 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 TWIST1Q15672 202 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 LINC00305Q7Z4B0 112 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 NFE4Q86UQ8 179 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 BPIFA4PQ86YQ2 179 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 C11orf72Q8NBR9 251 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 LINC00467Q9BRT7 94 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 PSENENQ9NZ42 101 aa5.84□□□□□ -1.47
COL4A3BP-206ENST00000508809 A0A087WTM6 91 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 TRAV12-3A0A0B4J271 114 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 LINC00854A0A1B0GVQ3 168 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 SLC17A3O00476 420 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 ZNF324O75467 553 aaPredicted RBP5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 CCNKO75909 580 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 SNRPCP09234 159 aaKnown RBP5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 IGLC2P0DOY2 106 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 UBE2MP61081 183 aaKnown RBP5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 ANXA2RQ3ZCQ2 193 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 DEDD2Q8WXF8 326 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 TMEM37Q8WXS4 190 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 SLIRPQ9GZT3 109 aaKnown RBP5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 PXMP4Q9Y6I8 212 aa5.83□□□□□ -1.48
COL4A3BP-206ENST00000508809 TRGV2A0A075B6R0 118 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 H3BQ15 152 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 K7EP13 123 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 GOSR2O14653 212 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 SPINK4O60575 86 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 NXPH4O95158 308 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 IFNA5P01569 189 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 SLC25A5P05141 298 aaKnown RBP5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 METTL15P1P0C7V9 234 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 LEPP41159 167 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 AP3S2P59780 193 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 RRAS2P62070 204 aaPredicted RBP5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 SLC38A11Q08AI6 406 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 SLAQ13239 276 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 LYPD5Q6UWN5 251 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 TOMM5Q8N4H5 51 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 ZNF680Q8NEM1 530 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 OR10P1Q8NGE3 313 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 RAB2BQ8WUD1 216 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 FAM19A4Q96LR4 140 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 BCL7BQ9BQE9 202 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 GGACTQ9BVM4 153 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 GSN-AS1Q9NRJ2 163 aa5.82□□□□□ -1.48
COL4A3BP-206ENST00000508809 C9orf170A2RU37 121 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 KLLNB2CW77 178 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 AGPAT2O15120 278 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 ZNF253O75346 499 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 SMR3BP02814 79 aaPredicted RBP5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 TMBIM6P55061 237 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 TAS2R30P59541 319 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 ARL16Q0P5N6 197 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 OPCMLQ14982 345 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 GUK1Q16774 197 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 ZNF546Q86UE3 836 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 EIF4E3Q8N5X7 224 aaKnown RBP5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 MRPL53Q96EL3 112 aaKnown RBP5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 ST6GAL2Q96JF0 529 aa5.81□□□□□ -1.48
COL4A3BP-206ENST00000508809 MRPS26Q9BYN8 205 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms