RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 TPRKBQ9Y3C4 175 aa2.71□□□□□ -1.98
SMARCA5-202ENST00000508573 MYH13Q9UKX3 1938 aa2.71□□□□□ -1.98
SMARCA5-202ENST00000508573 CCDC141Q6ZP82 1450 aa2.71□□□□□ -1.98
SMARCA5-202ENST00000508573 FYCO1Q9BQS8 1478 aa2.71□□□□□ -1.98
SMARCA5-202ENST00000508573 WDR90Q96KV7 1748 aa2.71□□□□□ -1.98
SMARCA5-202ENST00000508573 ARID1AO14497 2285 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 RBBP6Q7Z6E9 1792 aaKnown RBP2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 RBAKDNA6NC62 111 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 ZNF736B4DX44 427 aaPredicted RBP2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 YPEL1O60688 119 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 LINC00032P0C843 101 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 ZNF14P17017 642 aaPredicted RBP2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 NFYAP23511 347 aaPredicted RBP2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 CKS2P33552 79 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 ZNF117Q03924 483 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 SPRNQ5BIV9 151 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 HYLS1Q96M11 299 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 LINC00052Q96N35 136 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 AP4S1Q9Y587 144 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 CCDC88AQ3V6T2 1871 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 SCN8AQ9UQD0 1980 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 TRPM3Q9HCF6 1732 aaPredicted RBP2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 ANAPC1Q9H1A4 1944 aa2.7□□□□□ -1.98
SMARCA5-202ENST00000508573 GTF3C1Q12789 2109 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 RTEL1-TNFRSF6BF6WH68 1400 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 CASKIN1Q8WXD9 1431 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 MYO5AQ9Y4I1 1855 aaKnown RBP2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 LTBP4Q8N2S1 1624 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 TRAV3A0A0B4J244 114 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 C16orf90A8MZG2 172 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 ZNF861PO60384 105 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 NDUFB6O95139 128 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 UNQ5815/PRO19632Q6UWF5 114 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 ATP11AUNQ6ZP68 121 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 Q6ZQT0 140 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 ASF1BQ9NVP2 202 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 BET1LQ9NYM9 111 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 MAGI2Q86UL8 1455 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 PLEKHH2Q8IVE3 1493 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 SCAF11Q99590 1463 aaKnown RBP2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 ROBO1Q9Y6N7 1651 aa2.69□□□□□ -1.98
SMARCA5-202ENST00000508573 ABCC5O15440 1437 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 CPSF1Q10570 1443 aaKnown RBP2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 MEGF6O75095 1541 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 TRAV1-1A0A0B4J248 108 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 TRBV10-2A0A0K0K1G8 114 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 TMEM235A6NFC5 223 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 FAM24AA6NFZ4 105 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 E7EQL1 145 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 H3BPC8 53 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 H3BQ15 152 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 LYRM1O43325 122 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 IGHV3-53P01767 116 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 IGLV7-43P04211 117 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 COL8A2P25067 703 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 ETV6P41212 452 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 ROMO1P60602 79 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 EIF4EBP1Q13541 118 aaPredicted RBP2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 ESRGQ1W209 222 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 ASB16-AS1Q495Z4 193 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 Q6ZR54 194 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 FAM19A2Q8N3H0 131 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 Q8NAQ8 132 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 OR2T35Q8NGX2 323 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 ATP6V0E2Q8NHE4 81 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 VSTM2AQ8TAG5 236 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 PSMF1Q92530 271 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 LINC00467Q9BRT7 94 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 FAM215AQ9Y5M1 114 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 IFT140Q96RY7 1462 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 PTPRBP23467 1997 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 CROCCQ5TZA2 2017 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 HELZP42694 1942 aaKnown RBP2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 CHD1O14646 1710 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 ABCC3O15438 1527 aa2.68□□□□□ -1.98
SMARCA5-202ENST00000508573 MYO10Q9HD67 2058 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 PXDNLA1KZ92 1463 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 CCDC88BA6NC98 1476 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 hDV103S1A0JD37 113 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 C11orf86A6NJI1 115 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 G3V3Q6 166 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 H7C2G1 150 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 WISP3O95389 354 aaPredicted RBP2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 CPSF4O95639 269 aaKnown RBP2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 COX7CP15954 63 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 FXYD2P54710 66 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 DCDP81605 110 aaKnown RBP2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 INSL4Q14641 139 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 NNATQ16517 81 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 TDRG1Q3Y452 100 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 ZNF720Q7Z2F6 126 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 SBSPONQ8IVN8 264 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 Q8N8P6 123 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 ST20-AS1Q8NBB2 130 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 UBALD1Q8TB05 177 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 SLC50A1Q9BRV3 221 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 CST11Q9H112 138 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 DPH3P1Q9H4G8 78 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 TIMM9Q9Y5J7 89 aa2.67□□□□□ -1.98
SMARCA5-202ENST00000508573 ADGRB3O60242 1522 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms