RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 NCS1P62166 190 aa1.74□□□□□ -2.13
DHFR-204ENST00000508282 BLCAPP62952 87 aa1.74□□□□□ -2.13
DHFR-204ENST00000508282 Q6ZRN7 208 aaPredicted RBP1.74□□□□□ -2.13
DHFR-204ENST00000508282 ZNF833PQ6ZTB9 187 aa1.74□□□□□ -2.13
DHFR-204ENST00000508282 GKN2Q86XP6 184 aa1.74□□□□□ -2.13
DHFR-204ENST00000508282 OR5AS1Q8N127 324 aa1.74□□□□□ -2.13
DHFR-204ENST00000508282 OR4C6Q8NH72 309 aa1.74□□□□□ -2.13
DHFR-204ENST00000508282 CST11Q9H112 138 aa1.74□□□□□ -2.13
DHFR-204ENST00000508282 LAMB2P55268 1798 aa1.74□□□□□ -2.13
DHFR-204ENST00000508282 COL24A1Q17RW2 1714 aa1.74□□□□□ -2.13
DHFR-204ENST00000508282 HEATR1Q9H583 2144 aaKnown RBP1.73□□□□□ -2.13
DHFR-204ENST00000508282 TRGV2A0A075B6R0 118 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 TRBV6-8A0A0A6YYG3 113 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 C9orf170A2RU37 121 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 ZNF727A8MUV8 499 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 TSPAN19P0C672 248 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 CCL4P13236 92 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 HLA-DRB4P13762 266 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 ETV6P41212 452 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 AKR1D1P51857 326 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 PCBD1P61457 104 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 SNRPD3P62318 126 aaKnown RBP1.73□□□□□ -2.13
DHFR-204ENST00000508282 DEFB103AP81534 67 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 DIAPH2-AS1Q14236 149 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 TEX261Q6UWH6 196 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 TMEM91Q6ZNR0 172 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 CTAGE3PQ8IX95 158 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 NABP2Q9BQ15 211 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 REG4Q9BYZ8 158 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 TNFSF18Q9UNG2 199 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 HLA-DRB4X5D2U9 266 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 COL5A3P25940 1745 aaPredicted RBP1.73□□□□□ -2.13
DHFR-204ENST00000508282 BAHCC1Q9P281 2608 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 COL1A1P02452 1464 aaPredicted RBP1.73□□□□□ -2.13
DHFR-204ENST00000508282 USP54Q70EL1 1684 aa1.73□□□□□ -2.13
DHFR-204ENST00000508282 ALPK2Q86TB3 2170 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 PCNX2A6NKB5 2137 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 C3orf85A0A1B0GTC6 90 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 PNMA8CA0A1B0GUJ8 204 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 ZNF736B4DX44 427 aaPredicted RBP1.72□□□□□ -2.13
DHFR-204ENST00000508282 K7EP13 123 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 TPST1O60507 370 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 NCR2O95944 276 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 IGLC6P0CF74 106 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 KDELR1P24390 212 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 RPS25P62851 125 aaKnown RBP1.72□□□□□ -2.13
DHFR-204ENST00000508282 RPL13AP3Q6NVV1 102 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 CASC2Q6XLA1 102 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 Q8TAT8 98 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 C1orf54Q8WWF1 131 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 PSMF1Q92530 271 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 LPAR5Q9H1C0 372 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 COMMD3Q9UBI1 195 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 KLK9Q9UKQ9 250 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 ERG28Q9UKR5 140 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 RGS12O14924 1447 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 PRG4Q92954 1404 aaPredicted RBP1.72□□□□□ -2.13
DHFR-204ENST00000508282 NCOA3Q9Y6Q9 1424 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 LAMB4A4D0S4 1761 aa1.72□□□□□ -2.13
DHFR-204ENST00000508282 FREM3P0C091 2139 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 LINC00694P0DN24 101 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 RNASE3P12724 160 aaKnown RBP1.71□□□□□ -2.14
DHFR-204ENST00000508282 CKS2P33552 79 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 COPZ1P61923 177 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 FAM74A1Q5RGS3 127 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 TEN1Q86WV5 123 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 LINC00269Q8N2A0 174 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 OR10AC1Q8NH08 325 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 ORMDL1Q9P0S3 153 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 METTL1Q9UBP6 276 aaKnown RBP1.71□□□□□ -2.14
DHFR-204ENST00000508282 SYNJ1O43426 1573 aa1.71□□□□□ -2.14
DHFR-204ENST00000508282 MYH13Q9UKX3 1938 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 CNBPP62633 177 aaKnown RBP1.7□□□□□ -2.14
DHFR-204ENST00000508282 ASB16-AS1Q495Z4 193 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 C10orf111Q8N326 155 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 OTOSQ8NHW6 89 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 PATE1Q8WXA2 126 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 LINC00052Q96N35 136 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 CIB3Q96Q77 187 aaPredicted RBP1.7□□□□□ -2.14
DHFR-204ENST00000508282 SLC35B3Q9H1N7 401 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 MPC1Q9Y5U8 109 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 RFX7Q2KHR2 1363 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 MYOFQ9NZM1 2061 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 PTPRFP10586 1907 aa1.7□□□□□ -2.14
DHFR-204ENST00000508282 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.69□□□□□ -2.14
DHFR-204ENST00000508282 ARHGAP31Q2M1Z3 1444 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 LOC107984156A0A0G2JMH3 177 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 F8W1H4 67 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 NPFFO15130 113 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 CCL16O15467 120 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 YPEL1O60688 119 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 EDF1O60869 148 aaKnown RBP1.69□□□□□ -2.14
DHFR-204ENST00000508282 RBP4P02753 201 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 CD3DP04234 171 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 CD14P08571 375 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 DNAJB13P59910 316 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 CLLU1Q5K131 121 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 KRTAP26-1Q6PEX3 210 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.69□□□□□ -2.14
DHFR-204ENST00000508282 FOXI2Q6ZQN5 318 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms