RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 ABCA4P78363 2273 aa10.45□□□□□ -0.74
SNCAIP-209ENST00000508017 IGHV3-35A0A0C4DH35 117 aa10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 G3V4G9 280 aa10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 LY6HO94772 140 aa10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 ORM1P02763 201 aa10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 PPIFP30405 207 aaKnown RBP10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 LEPP41159 167 aa10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 FXYD2P54710 66 aa10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 ERCC8Q13216 396 aa10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 ODF1Q14990 250 aa10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 COL25A1Q9BXS0 654 aaPredicted RBP10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 MAP1LC3AQ9H492 121 aa10.44□□□□□ -0.74
SNCAIP-209ENST00000508017 WNK2Q9Y3S1 2297 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 B9A039 149 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 NDUFA3O95167 84 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 GCSHP23434 173 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 C5orf64Q2M2E5 130 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 PRR30Q53SZ7 412 aaPredicted RBP10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 NEGR1Q7Z3B1 354 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 C21orf62Q9NYP8 219 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 DPM3Q9P2X0 92 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 HHLA3Q9XRX5 114 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 K7ERJ3 54 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 RPL7P18124 248 aaKnown RBP10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 Q8NA96 180 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 NPBQ8NG41 125 aa10.43□□□□□ -0.74
SNCAIP-209ENST00000508017 PRAC2D3DTV9 90 aa10.42□□□□□ -0.74
SNCAIP-209ENST00000508017 K7EMI3 77 aa10.42□□□□□ -0.74
SNCAIP-209ENST00000508017 TNFRSF6BO95407 300 aa10.42□□□□□ -0.74
SNCAIP-209ENST00000508017 ZNF562Q6V9R5 426 aa10.42□□□□□ -0.74
SNCAIP-209ENST00000508017 ARPC1AQ92747 370 aa10.42□□□□□ -0.74
SNCAIP-209ENST00000508017 NPFFR1Q9GZQ6 430 aa10.42□□□□□ -0.74
SNCAIP-209ENST00000508017 HRNRQ86YZ3 2850 aaPredicted RBP10.42□□□□□ -0.74
SNCAIP-209ENST00000508017 BMI1P35226 326 aa10.42□□□□□ -0.74
SNCAIP-209ENST00000508017 DYNAPQ8N1N2 210 aa10.42□□□□□ -0.74
SNCAIP-209ENST00000508017 SPTBN2O15020 2390 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 RIF1Q5UIP0 2472 aaKnown RBP10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 PRSS1P07477 247 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 CD3EP07766 207 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 SAMD5Q5TGI4 173 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 GTSCR1Q86UQ5 136 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 ZMAT4Q9H898 229 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 CTSGP08311 255 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 FCER1GP30273 86 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 ZNF672Q499Z4 452 aaPredicted RBP10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 LY6G5BQ8NDX9 201 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 LINC01560Q8TB33 94 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 ZNF48Q96MX3 618 aaPredicted RBP10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 FOXC2Q99958 501 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
SNCAIP-209ENST00000508017 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
SNCAIP-209ENST00000508017 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.74
SNCAIP-209ENST00000508017 NCBP2LA6PVI3 153 aaKnown RBP10.4□□□□□ -0.74
SNCAIP-209ENST00000508017 SMIM13P0DJ93 91 aa10.4□□□□□ -0.74
SNCAIP-209ENST00000508017 RNF182Q8N6D2 247 aa10.4□□□□□ -0.74
SNCAIP-209ENST00000508017 TMEM158Q8WZ71 300 aa10.4□□□□□ -0.74
SNCAIP-209ENST00000508017 ANKHD1Q8IWZ3 2542 aaKnown RBP10.4□□□□□ -0.74
SNCAIP-209ENST00000508017 FABP2P12104 132 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 OR11H6Q8NGC7 330 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 OR5A1Q8NGJ0 315 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 CNFNQ9BYD5 112 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 CACNA1BQ00975 2339 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 TMEM238C9JI98 176 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 IGKCP01834 107 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 TRGV3P03979 118 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 IL17RELQ6ZVW7 336 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 TTC9CQ8N5M4 171 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 PIFOQ8TCI5 191 aa10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 TLN1Q9Y490 2541 aaKnown RBP10.39□□□□□ -0.75
SNCAIP-209ENST00000508017 ZFHX2Q9C0A1 2572 aaPredicted RBP10.38□□□□□ -0.75
SNCAIP-209ENST00000508017 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
SNCAIP-209ENST00000508017 IGHV3-66A0A0C4DH42 116 aa10.38□□□□□ -0.75
SNCAIP-209ENST00000508017 ZC2HC1BQ5TFG8 222 aa10.38□□□□□ -0.75
SNCAIP-209ENST00000508017 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
SNCAIP-209ENST00000508017 NXT2Q9NPJ8 142 aaKnown RBP10.38□□□□□ -0.75
SNCAIP-209ENST00000508017 HIGD1BQ9P298 99 aa10.38□□□□□ -0.75
SNCAIP-209ENST00000508017 C11orf21Q9P2W6 132 aa10.38□□□□□ -0.75
SNCAIP-209ENST00000508017 TMEM8BA6NDV4 472 aa10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 GRNP28799 593 aaKnown RBP10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 PHLDA1Q8WV24 401 aaPredicted RBP10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 IGLV2-18A0A075B6J9 118 aa10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 TRAV26-2A0A0B4J265 109 aa10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 ODF3BA8MYP8 253 aa10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 CEACAM3P40198 252 aa10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 SRSF2Q01130 221 aaKnown RBP10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 NHP2Q9NX24 153 aaKnown RBP10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 AGRNO00468 2067 aa10.37□□□□□ -0.75
SNCAIP-209ENST00000508017 IGHV3OR16-13A0A075B7E8 117 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 IGHV3-74A0A0B4J1X5 117 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 IGKV3D-20A0A0C4DH25 116 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 DPM2O94777 84 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 TMEM160Q9NX00 188 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 MED13LQ71F56 2210 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 TRAV40A0A0B4J280 105 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 TEX48A0A1B0GUV7 120 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 RPL24P83731 157 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms