RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TRIOBPQ9H2D6 2365 aa13.8□□□□□ -0.2
NUP54-205ENST00000507257 A0A1B0GV72 72 aa13.79□□□□□ -0.2
NUP54-205ENST00000507257 SCGB2A1O75556 95 aa13.79□□□□□ -0.2
NUP54-205ENST00000507257 C12orf74Q32Q52 190 aa13.79□□□□□ -0.2
NUP54-205ENST00000507257 GTSCR1Q86UQ5 136 aa13.79□□□□□ -0.2
NUP54-205ENST00000507257 DYNLRB1Q9NP97 96 aa13.79□□□□□ -0.2
NUP54-205ENST00000507257 MSRB1Q9NZV6 116 aa13.79□□□□□ -0.2
NUP54-205ENST00000507257 TSSC4Q9Y5U2 329 aaPredicted RBP13.79□□□□□ -0.2
NUP54-205ENST00000507257 IL17RELQ6ZVW7 336 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 TTC9CQ8N5M4 171 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 TTTY13Q9BZ97 58 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 GTSF1LQ9H1H1 148 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 A0A087WX48 190 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 TIMM23O14925 209 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 ORM1P02763 201 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 PLNP26678 52 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 WFDC2Q14508 124 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 Q8TAT8 98 aa13.78□□□□□ -0.2
NUP54-205ENST00000507257 PIP4P1Q86T03 277 aa13.77□□□□□ -0.21
NUP54-205ENST00000507257 DTX2Q86UW9 622 aa13.77□□□□□ -0.21
NUP54-205ENST00000507257 ZGRF1Q86YA3 2104 aa13.77□□□□□ -0.21
NUP54-205ENST00000507257 MYOZ3Q8TDC0 251 aa13.77□□□□□ -0.21
NUP54-205ENST00000507257 CFHR4Q92496 578 aa13.77□□□□□ -0.21
NUP54-205ENST00000507257 C21orf62Q9NYP8 219 aa13.77□□□□□ -0.21
NUP54-205ENST00000507257 SMAD5-AS1Q9Y6J3 95 aa13.77□□□□□ -0.21
NUP54-205ENST00000507257 TRAV12-1A0A0B4J245 112 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 GAS8-AS1O95177 125 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 COX7A1P24310 79 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 LAGE3Q14657 143 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 RRN3P1Q2M238 152 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 MRPL35Q9NZE8 188 aaKnown RBP13.76□□□□□ -0.21
NUP54-205ENST00000507257 PRO0461Q9UI25 63 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 CUL9Q8IWT3 2517 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 TRBV7-3A0A075B6L6 115 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 TRAV40A0A0B4J280 105 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 A0A0G2JNJ9 132 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 PRB4P10163 310 aaPredicted RBP13.76□□□□□ -0.21
NUP54-205ENST00000507257 DLX1P56177 255 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 ATP6V0BQ99437 205 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 SPOCK3Q9BQ16 436 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 Q9UFV3 132 aa13.76□□□□□ -0.21
NUP54-205ENST00000507257 C5orf64Q2M2E5 130 aa13.75□□□□□ -0.21
NUP54-205ENST00000507257 NRACQ8N912 160 aa13.75□□□□□ -0.21
NUP54-205ENST00000507257 OR11H6Q8NGC7 330 aa13.75□□□□□ -0.21
NUP54-205ENST00000507257 SPAG8Q99932 426 aaPredicted RBP13.75□□□□□ -0.21
NUP54-205ENST00000507257 IGHV4-4A0A075B6R2 117 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 RAB9AP51151 201 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 SMAGPQ0VAQ4 97 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 GAGE13Q4V321 117 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 TCTEX1D4Q5JR98 221 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 MAPKAPK5-AS1Q8N8E1 139 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 TMEM160Q9NX00 188 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 DPM3Q9P2X0 92 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 NCBP2LA6PVI3 153 aaKnown RBP13.74□□□□□ -0.21
NUP54-205ENST00000507257 E7EQL1 145 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 LY6G5BQ8NDX9 201 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 ATP6V0E2Q8NHE4 81 aa13.74□□□□□ -0.21
NUP54-205ENST00000507257 B9A039 149 aa13.73□□□□□ -0.21
NUP54-205ENST00000507257 H3BMG7 143 aa13.72□□□□□ -0.21
NUP54-205ENST00000507257 DYNAPQ8N1N2 210 aa13.72□□□□□ -0.21
NUP54-205ENST00000507257 SPENQ96T58 3664 aaKnown RBP13.72□□□□□ -0.21
NUP54-205ENST00000507257 NCOR1O75376 2440 aa13.72□□□□□ -0.21
NUP54-205ENST00000507257 F8VRH5 84 aa13.72□□□□□ -0.21
NUP54-205ENST00000507257 CTSGP08311 255 aa13.72□□□□□ -0.21
NUP54-205ENST00000507257 GATA1P15976 413 aaPredicted RBP13.72□□□□□ -0.21
NUP54-205ENST00000507257 CCDC144NLQ6NUI1 221 aa13.72□□□□□ -0.21
NUP54-205ENST00000507257 HIST1H4GQ99525 98 aa13.72□□□□□ -0.21
NUP54-205ENST00000507257 SLC50A1Q9BRV3 221 aa13.72□□□□□ -0.21
NUP54-205ENST00000507257 H7C1H1 209 aa13.71□□□□□ -0.21
NUP54-205ENST00000507257 ETDBQ3ZM63 59 aa13.71□□□□□ -0.21
NUP54-205ENST00000507257 S4R3C0 116 aa13.71□□□□□ -0.21
NUP54-205ENST00000507257 IGKV3D-20A0A0C4DH25 116 aa13.7□□□□□ -0.22
NUP54-205ENST00000507257 K7EMI3 77 aa13.7□□□□□ -0.22
NUP54-205ENST00000507257 SLC25A16P16260 332 aa13.7□□□□□ -0.22
NUP54-205ENST00000507257 PRB3Q04118 309 aaPredicted RBP13.7□□□□□ -0.22
NUP54-205ENST00000507257 PRRG2O14669 202 aa13.7□□□□□ -0.22
NUP54-205ENST00000507257 LCNL1Q6ZST4 164 aa13.7□□□□□ -0.22
NUP54-205ENST00000507257 MRPL53Q96EL3 112 aaKnown RBP13.7□□□□□ -0.22
NUP54-205ENST00000507257 MRAP2Q96G30 205 aa13.7□□□□□ -0.22
NUP54-205ENST00000507257 HIF1ANQ9NWT6 349 aa13.7□□□□□ -0.22
NUP54-205ENST00000507257 AGRNO00468 2067 aa13.69□□□□□ -0.22
NUP54-205ENST00000507257 MYMXA0A1B0GTQ4 84 aa13.69□□□□□ -0.22
NUP54-205ENST00000507257 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.69□□□□□ -0.22
NUP54-205ENST00000507257 HLA-DMBP28068 263 aa13.69□□□□□ -0.22
NUP54-205ENST00000507257 KLK9Q2XQG4 91 aa13.69□□□□□ -0.22
NUP54-205ENST00000507257 KLK9Q9UKQ9 250 aa13.69□□□□□ -0.22
NUP54-205ENST00000507257 IGHV7-4-1A0A0J9YVY3 117 aa13.68□□□□□ -0.22
NUP54-205ENST00000507257 SH2D6Q7Z4S9 175 aa13.68□□□□□ -0.22
NUP54-205ENST00000507257 ODF3BA8MYP8 253 aa13.68□□□□□ -0.22
NUP54-205ENST00000507257 OR11H12B2RN74 326 aa13.68□□□□□ -0.22
NUP54-205ENST00000507257 GOSR1O95249 250 aa13.68□□□□□ -0.22
NUP54-205ENST00000507257 TRGV3P03979 118 aa13.68□□□□□ -0.22
NUP54-205ENST00000507257 OR11H1Q8NG94 326 aa13.68□□□□□ -0.22
NUP54-205ENST00000507257 OR11H2Q8NH07 326 aa13.68□□□□□ -0.22
NUP54-205ENST00000507257 ERCC8Q13216 396 aa13.67□□□□□ -0.22
NUP54-205ENST00000507257 NDPQ00604 133 aa13.66□□□□□ -0.22
NUP54-205ENST00000507257 ORMDL2Q53FV1 153 aa13.66□□□□□ -0.22
NUP54-205ENST00000507257 IGFL4Q6B9Z1 124 aa13.66□□□□□ -0.22
NUP54-205ENST00000507257 MORN3Q6PF18 240 aaPredicted RBP13.66□□□□□ -0.22
NUP54-205ENST00000507257 Q8N6K4 173 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms