RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FABP12A6NFH5 140 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 TAAR5O14804 337 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 HYPMO75409 117 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 GPX1P07203 203 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 RCVRNP35243 200 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 RND3P61587 244 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 AARDQ4LEZ3 155 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 GPR107Q5VW38 600 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 SPINK6Q6UWN8 80 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 Q6ZQT7 251 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 C9orf163Q8N9P6 203 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 OR4D10Q8NGI6 311 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 LINC00477Q96M19 166 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 GTSF1LQ9H1H1 148 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 ZNF331Q9NQX6 463 aaPredicted RBP4.53□□□□□ -1.68
VCAN-207ENST00000507162 VAX2Q9UIW0 290 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 KLK12Q9UKR0 248 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 A0A0A6YYH2 397 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 TRAV4A0A0B4J268 109 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 A6NJ64 397 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 PRSS1P07477 247 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 OPCMLQ14982 345 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 DGAT2L7PQ6IED9 249 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 ACOT7LQ6ZUV0 252 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 OR1S1Q8NH92 325 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 DTD1Q8TEA8 209 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 UBE2WQ96B02 151 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 ODF3Q96PU9 254 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 SLC50A1Q9BRV3 221 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 PRADC1Q9BSG0 188 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 RBKSQ9H477 322 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 COPZ2Q9P299 210 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 URGCP-MRPS24S4R325 110 aa4.52□□□□□ -1.69
VCAN-207ENST00000507162 TRAV26-2A0A0B4J265 109 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 FAM231BA6NCW3 169 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 PGPEP1LA6NFU8 196 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 USP17L23D6RBM5 183 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 IL5P05113 134 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 OR10J4P0C629 311 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 CHTF8P0CG12 524 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 PRR3P79522 188 aaKnown RBP4.51□□□□□ -1.69
VCAN-207ENST00000507162 MXD1Q05195 221 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 MUC21Q5SSG8 566 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 LCN15Q6UWW0 184 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 LYPD6BQ8NI32 183 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 RASL10AQ92737 203 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 S100A14Q9HCY8 104 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 ANAPC10Q9UM13 185 aa4.51□□□□□ -1.69
VCAN-207ENST00000507162 KLLNB2CW77 178 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 SLC17A3O00476 420 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 OR4E1P0C645 316 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 SULT1A3P0DMM9 295 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 SULT1A4P0DMN0 295 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 GATA1P15976 413 aaPredicted RBP4.5□□□□□ -1.69
VCAN-207ENST00000507162 CXCL2P19875 107 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 PRSS3P35030 304 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 RAB11AP62491 216 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 SELENOHQ8IZQ5 122 aaKnown RBP4.5□□□□□ -1.69
VCAN-207ENST00000507162 SLC25A29Q8N8R3 303 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 CCDC71LQ8N9Z2 235 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 S100A16Q96FQ6 103 aaKnown RBP4.5□□□□□ -1.69
VCAN-207ENST00000507162 ZNF486Q96H40 463 aaPredicted RBP4.5□□□□□ -1.69
VCAN-207ENST00000507162 SPXQ9BT56 116 aa4.5□□□□□ -1.69
VCAN-207ENST00000507162 IGHV3-73A0A0B4J1V6 119 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 TEX13DA0A0J9YY54 714 aaPredicted RBP4.49□□□□□ -1.69
VCAN-207ENST00000507162 TNFAIP8O95379 198 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 CDS2O95674 445 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 SEC11BP0C7V7 166 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 ATP5IP56385 69 aaPredicted RBP4.49□□□□□ -1.69
VCAN-207ENST00000507162 RPL19P84098 196 aaKnown RBP4.49□□□□□ -1.69
VCAN-207ENST00000507162 AKR1C1Q04828 323 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 TMEM268Q5VZI3 342 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 S100A7AQ86SG5 101 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 LHFPL5Q8TAF8 219 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 RNF185Q96GF1 192 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 OR51M1Q9H341 326 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 TXNL4BQ9NX01 149 aaKnown RBP4.49□□□□□ -1.69
VCAN-207ENST00000507162 CACFD1Q9UGQ2 172 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 TPRKBQ9Y3C4 175 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 PXMP4Q9Y6I8 212 aa4.49□□□□□ -1.69
VCAN-207ENST00000507162 SMCO3A2RU48 225 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 FBLL1A6NHQ2 334 aaKnown RBP4.48□□□□□ -1.69
VCAN-207ENST00000507162 MRPS12O15235 138 aaKnown RBP4.48□□□□□ -1.69
VCAN-207ENST00000507162 ATP5HO75947 161 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 HLA-DQA1P01909 254 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 LINC00869P0C866 280 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 IAPPP10997 89 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 SDC2P34741 201 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 POLR2GP62487 172 aaKnown RBP eCLIP4.48□□□□□ -1.69
VCAN-207ENST00000507162 SRSF3P84103 164 aaKnown RBP4.48□□□□□ -1.69
VCAN-207ENST00000507162 SRSF9Q13242 221 aaKnown RBP eCLIP4.48□□□□□ -1.69
VCAN-207ENST00000507162 RAB31Q13636 194 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 CIRBPQ14011 172 aaKnown RBP4.48□□□□□ -1.69
VCAN-207ENST00000507162 TMEM183BQ1AE95 376 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 PATE2Q6UY27 113 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 CYP2G1PQ6ZSU1 146 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 TMEM183AQ8IXX5 376 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 ZFAND1Q8TCF1 268 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 GLYATL2Q8WU03 294 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 ARL6Q9H0F7 186 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms