RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 SFTPA2Q8IWL1 248 aa4.82□□□□□ -1.64
PDE4D-216ENST00000507116 SFTPA1Q8IWL2 248 aa4.82□□□□□ -1.64
PDE4D-216ENST00000507116 RPP21Q9H633 154 aaKnown RBP4.82□□□□□ -1.64
PDE4D-216ENST00000507116 PRRC2BQ5JSZ5 2229 aaKnown RBP4.81□□□□□ -1.64
PDE4D-216ENST00000507116 FOXS1O43638 330 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 IFI27P40305 119 aaPredicted RBP4.81□□□□□ -1.64
PDE4D-216ENST00000507116 SNRPD3P62318 126 aaKnown RBP4.81□□□□□ -1.64
PDE4D-216ENST00000507116 NSUN5P1Q3KNT7 163 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 C9orf139Q6ZV77 190 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 FOXQ1Q9C009 403 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 TAC3Q9UHF0 121 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 PRO1854Q9UHT4 67 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 FREM3P0C091 2139 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 PGLYRP4Q96LB8 373 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 DYNLRB1Q9NP97 96 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 UNC80Q8N2C7 3258 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 IGLV1-36A0A0B4J1U3 117 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.81□□□□□ -1.64
PDE4D-216ENST00000507116 PLAC8L1A1L4L8 177 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 H3BTX0 84 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 SPRY2O43597 315 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 SS18L1O75177 396 aaPredicted RBP4.81□□□□□ -1.64
PDE4D-216ENST00000507116 SAA4P35542 130 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 LY6KQ17RY6 165 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 RPP25Q9BUL9 199 aaKnown RBP4.81□□□□□ -1.64
PDE4D-216ENST00000507116 SRXN1Q9BYN0 137 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 HEATR5BQ9P2D3 2071 aa4.81□□□□□ -1.64
PDE4D-216ENST00000507116 THADAQ6YHU6 1953 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 CDH23Q9H251 3354 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 PRSS1P07477 247 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 SLC25A15Q9Y619 301 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 KIAA1549LQ6ZVL6 1849 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 A0A0B4J2C4 111 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 A0A1W2PP55 124 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 BUB3O43684 328 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 FHL2Q14192 279 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 LY6G5BQ8NDX9 201 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 TMEM190Q8WZ59 177 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 CCL28Q9NRJ3 127 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 RBM12B-AS1Q9P1G2 102 aa4.8□□□□□ -1.64
PDE4D-216ENST00000507116 CCL1P22362 96 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 FOXF2Q12947 444 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 SDIM1Q6ZPB5 146 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 ABCA7Q8IZY2 2146 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 ZNF837Q96EG3 531 aaPredicted RBP4.79□□□□□ -1.64
PDE4D-216ENST00000507116 EYSQ5T1H1 3165 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 COL4A3Q01955 1670 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 EP300Q09472 2414 aaPredicted RBP4.79□□□□□ -1.64
PDE4D-216ENST00000507116 TRBV19A0A075B6N1 114 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 TRBV7-1A0A0A6YYK4 115 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 TIMM17BO60830 172 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 IGKV1-5P01602 117 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 SS18Q15532 418 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 MIC13Q5XKP0 118 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 PROK2Q9HC23 129 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 PIEZO1Q92508 2521 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 USP17L23D6RBM5 183 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 RNASE2P10153 161 aaKnown RBP4.79□□□□□ -1.64
PDE4D-216ENST00000507116 PLNP26678 52 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 CDAP32320 146 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 RIGQ13278 110 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 PAXXQ9BUH6 204 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 SHANK1Q9Y566 2161 aa4.79□□□□□ -1.64
PDE4D-216ENST00000507116 WDR87Q6ZQQ6 2873 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 IGKV1-9A0A0C4DH69 117 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 CFHR3Q02985 330 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 PAX8Q06710 450 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 Q8N8P6 123 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 NUP37Q8NFH4 326 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 ZNF492Q9P255 531 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 MOB4Q9Y3A3 225 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 TPRP12270 2363 aaKnown RBP4.78□□□□□ -1.64
PDE4D-216ENST00000507116 A0A087WWL8 130 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 IGKV1D-13A0A0B4J2D9 117 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 IGHG2P01859 326 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 IGKV1-13P0DP09 117 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 EEF1AKMT3Q96AZ1 226 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 SLC50A1Q9BRV3 221 aa4.78□□□□□ -1.64
PDE4D-216ENST00000507116 IGKV1D-42A0A075B6H8 117 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 LOC389332A0A1B0GUA5 103 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 C17orf100A8MU93 164 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 IGKV1-39P01597 117 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 IGKV1D-39P04432 117 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 ZNF497Q6ZNH5 498 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 FGFBP3Q8TAT2 258 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 SMCR5Q8TEV8 140 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 C7orf69Q9H7B7 122 aa4.78□□□□□ -1.65
PDE4D-216ENST00000507116 MUC6Q6W4X9 2439 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 IQCF6A8MYZ5 107 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 CFC1BP0CG36 223 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 CFC1P0CG37 223 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 TET1Q8NFU7 2136 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 CACNA1HO95180 2353 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 TRAV40A0A0B4J280 105 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 IGHV1-58A0A0C4DH39 117 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 A0A1B0GUT8 65 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 SERTAD4-AS1Q5TG53 156 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 ZNF714Q96N38 554 aa4.77□□□□□ -1.65
PDE4D-216ENST00000507116 A0A1W2PQD3 144 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms