RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 M0R2Z0 102 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 ZNF253O75346 499 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 SLC25A5P05141 298 aaKnown RBP6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 RAB5CP51148 216 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 IFITM2Q01629 132 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 PDE6HQ13956 83 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 DPPA3Q6W0C5 159 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 FOXI2Q6ZQN5 318 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 GOLT1AQ6ZVE7 132 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 Q8TAT8 98 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 FAM110AQ9BQ89 295 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 AGPAT4-IT1Q9H0P7 198 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 TRAV12-2A0A075B6T6 113 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 DIRC3C9JPN6 131 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 PRM2P04554 102 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 CT45A10P0DMU9 189 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 SPINK13Q1W4C9 94 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 AMTNQ6UX39 209 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 Q6ZQT7 251 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 RARRES2Q99969 163 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 CA1P00915 261 aaPredicted RBP6.46□□□□□ -1.38
SCAMP1-202ENST00000506858 IFNA7P01567 189 aa6.46□□□□□ -1.38
SCAMP1-202ENST00000506858 DEFB135Q30KP9 77 aa6.46□□□□□ -1.38
SCAMP1-202ENST00000506858 SAMD13Q5VXD3 122 aa6.46□□□□□ -1.38
SCAMP1-202ENST00000506858 OR10J6PQ8NGY7 276 aa6.46□□□□□ -1.38
SCAMP1-202ENST00000506858 CMTM2Q8TAZ6 248 aa6.46□□□□□ -1.38
SCAMP1-202ENST00000506858 CSTL1Q9H114 145 aa6.46□□□□□ -1.38
SCAMP1-202ENST00000506858 TRAV1-1A0A0B4J248 108 aa6.45□□□□□ -1.38
SCAMP1-202ENST00000506858 A0A1W2PRE2 83 aa6.45□□□□□ -1.38
SCAMP1-202ENST00000506858 A8MZ25 164 aa6.45□□□□□ -1.38
SCAMP1-202ENST00000506858 CSN1S1P47710 185 aa6.45□□□□□ -1.38
SCAMP1-202ENST00000506858 LYPD1Q8N2G4 141 aa6.45□□□□□ -1.38
SCAMP1-202ENST00000506858 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
SCAMP1-202ENST00000506858 EPDR1Q9UM22 224 aa6.45□□□□□ -1.38
SCAMP1-202ENST00000506858 PRELID1Q9Y255 219 aa6.45□□□□□ -1.38
SCAMP1-202ENST00000506858 IGHV3OR16-12A0A075B7B8 117 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 DUSP14O95147 198 aaKnown RBP6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 HBE1P02100 147 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 TCRAP04437 139 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 NMBP08949 121 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 BLOC1S1P78537 153 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 PRR9Q5T870 116 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 CCDC28AQ8IWP9 274 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 TVP23CQ96ET8 276 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 B9D2Q9BPU9 175 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 PPP1R14DQ9NXH3 145 aa6.44□□□□□ -1.38
SCAMP1-202ENST00000506858 C11orf94C9JXX5 98 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 CRXO43186 299 aaPredicted RBP6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 RBMY1A1P0DJD3 496 aaKnown RBP6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 RBMY1CP0DJD4 496 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 RBMY1FQ15415 496 aaKnown RBP6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 C5orf17Q8NAS9 161 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 RXFP4Q8TDU9 374 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 MRPL53Q96EL3 112 aaKnown RBP6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 A8MTW9 85 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 PEX7O00628 323 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 DEFB4AO15263 64 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 IGLV2-11P01706 119 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 RNASE4P34096 147 aaKnown RBP6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 APOC4P55056 127 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 BTN1A1Q13410 526 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 TMEM78Q5T7P6 136 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 C9orf47Q6ZRZ4 202 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 PRNTQ86SH4 94 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 C8orf49Q96NF6 230 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 OVOL2Q9BRP0 275 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 DERL1Q9BUN8 251 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 ZNF492Q9P255 531 aa6.43□□□□□ -1.38
SCAMP1-202ENST00000506858 TRAV12-3A0A0B4J271 114 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 KIR2DL5BA0A0G2JN68 375 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 KIR2DL5BA0A0G2JPC4 375 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 LOC102723971A0A1B0GUV8 181 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 F6UZH7 168 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 PAX4O43316 350 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 BCL2P10415 239 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 ZNF138P52744 262 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 SRSF3P84103 164 aaKnown RBP6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 TOR2AQ5JU69 321 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 GFI1BQ5VTD9 330 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 KIR2DL5AQ8N109 375 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 C1orf158Q8N1D5 194 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 ZFAND2AQ8N6M9 145 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 CSNK1G2-AS1Q8NCQ2 148 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 KIR2DL5BQ8NHK3 375 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 LYPD6BQ8NI32 183 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 LINC00477Q96M19 166 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 PSG8Q9UQ74 426 aa6.42□□□□□ -1.38
SCAMP1-202ENST00000506858 RAB19A4D1S5 217 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 RBFOX3A6NFN3 312 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 C9JQL5 133 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 SPRY2O43597 315 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 HTN1P15515 57 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 MORN3Q6PF18 240 aaPredicted RBP6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 CYB561D1Q8N8Q1 229 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 NHLRC2Q8NBF2 726 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 OR11H2Q8NH07 326 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 RCHY1Q96PM5 261 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 TM2D3Q9BRN9 247 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms