RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CLECL1Q8IZS7 167 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 MUCL1Q96DR8 90 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 HYLS1Q96M11 299 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 MCEEQ96PE7 176 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 AIF1LQ9BQI0 150 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 TCEAL2Q9H3H9 227 aaPredicted RBP0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 BATF3Q9NR55 127 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 SPANXA1Q9NS26 97 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 CHCHD2Q9Y6H1 151 aaPredicted RBP0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 OVOS2A0A0G2JMS6 1433 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 FAM135BQ49AJ0 1406 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 HEATR1Q9H583 2144 aaKnown RBP0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 PTPRDP23468 1912 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 ARHGEF10O15013 1369 aa0.7□□□□□ -2.3
TOPBP1-204ENST00000505804 ANK1P16157 1881 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 HERC1Q15751 4861 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 E9PCH4 1651 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 MYO9AB2RTY4 2548 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 LRRK2Q5S007 2527 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 TENM3Q9P273 2699 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 WDR97A6NE52 1622 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 TRAV36DV7A0A075B6V5 113 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 A0A087WSZ3 146 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 TRAV10A0A0B4J240 114 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 LOC107984640A0A0U1RRK4 108 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 A0A1B0GX51 115 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 hDV103S1A0JD37 113 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 CCDC160A6NGH7 325 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 OR2T8A6NH00 312 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 ZNF736B4DX44 427 aaPredicted RBP0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 RPS28P62857 69 aaKnown RBP0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 PSG9Q00887 426 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 OR8B8Q15620 311 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 VMA21Q3ZAQ7 101 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 C2orf82Q6UX34 121 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 ZNF833PQ6ZTB9 187 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 LINC00305Q7Z4B0 112 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 TEX29Q8N6K0 151 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 FAM216BQ8N7L0 139 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 PATE1Q8WXA2 126 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 DIRC1Q969H9 104 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 RAB37Q96AX2 223 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 TP53RKQ96S44 253 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 LXNQ9BS40 222 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 GGACTQ9BVM4 153 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 RASL12Q9NYN1 266 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 JPT1Q9UK76 154 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 KIDINS220Q9ULH0 1771 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 ADGRB2O60241 1585 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 SPTBN5Q9NRC6 3674 aaKnown RBP0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 EYSQ5T1H1 3165 aa0.69□□□□□ -2.3
TOPBP1-204ENST00000505804 CASP8AP2Q9UKL3 1982 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 FLNCQ14315 2725 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 CECR2Q9BXF3 1484 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 PHRF1Q9P1Y6 1649 aaKnown RBP0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 UTRNP46939 3433 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 TRAV27A0A087WT01 109 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 TRAV13-1A0A0B4J241 112 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 TRBV27A0A0K0K1C4 114 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 M0R2N4 97 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 DEGS1O15121 323 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 ARPC5O15511 151 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 LYRM1O43325 122 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 ERC2-IT1O76042 136 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 CD2P06729 351 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 CXCL8P10145 99 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 FABP4P15090 132 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 CNBPP62633 177 aaKnown RBP0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 CCDC153Q494R4 210 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 GDF5OSQ5U4N7 250 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 KRTAP26-1Q6PEX3 210 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 DNAH12Q6ZR08 3092 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 ARPINQ7Z6K5 226 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 OR8I2Q8N0Y5 310 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 OR5AS1Q8N127 324 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 LRRC18Q8N456 261 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 TMEM229BQ8NBD8 167 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 OR4B1Q8NGF8 309 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 OR5H6Q8NGV6 325 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 CCL4L1Q8NHW4 92 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 Q8TAT8 98 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 BRK1Q8WUW1 75 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 C4orf3Q8WVX3 66 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 PRELID3AQ96N28 172 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 TRPM7Q96QT4 1865 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 NIT2Q9NQR4 276 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 CBLN4Q9NTU7 201 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 SPANXCQ9NY87 97 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 RFX7Q2KHR2 1363 aa0.68□□□□□ -2.3
TOPBP1-204ENST00000505804 COL1A1P02452 1464 aaPredicted RBP0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 DSPPQ9NZW4 1301 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 CDK5RAP2Q96SN8 1893 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 BORCS7-ASMTA0A0B4J1R7 106 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 C5orf67F2Z3F1 127 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 M0QZK8 103 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 CCL16O15467 120 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 DPM2O94777 84 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 SCTP09683 121 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 CRYGSP22914 178 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 SRP9P49458 86 aaKnown RBP0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms