RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ZNF688P0C7X2 276 aa6.01□□□□□ -1.45
CDC42SE2-208ENST00000505065 TDRG1Q3Y452 100 aa6.01□□□□□ -1.45
CDC42SE2-208ENST00000505065 SBSPONQ8IVN8 264 aa6.01□□□□□ -1.45
CDC42SE2-208ENST00000505065 S100A9P06702 114 aaKnown RBP6□□□□□ -1.45
CDC42SE2-208ENST00000505065 OR10J4P0C629 311 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 TSPOP30536 169 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 CNN1P51911 297 aaKnown RBP6□□□□□ -1.45
CDC42SE2-208ENST00000505065 C1orf158Q8N1D5 194 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 FAM74A1Q5RGS3 127 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 PRR9Q5T870 116 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 Q8NAQ8 132 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 C18orf15Q96N68 181 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 UBQLN2Q9UHD9 624 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 SPRY2O43597 315 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 BCL2P10415 239 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 GBGT1Q8N5D6 347 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 AGRNO00468 2067 aa6□□□□□ -1.45
CDC42SE2-208ENST00000505065 ALKAL2Q6UX46 152 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 FAM213BQ8TBF2 198 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 VGLL1Q99990 258 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 LY96Q9Y6Y9 160 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 KNCNA6PVL3 124 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 DNASE2O00115 360 aaPredicted RBP5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 OR7C2O60412 319 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 APOC4P55056 127 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 FMC1Q96HJ9 113 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 M0R3E3 92 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 IFNA7P01567 189 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 C10orf91Q5T1B1 145 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 IGFL4Q6B9Z1 124 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 LINC00862A6NCI5 91 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 TMEM250H0YL14 139 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 PEX7O00628 323 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 CXCL1P09341 107 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 FGF8P55075 233 aaPredicted RBP5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 GUCA2BQ16661 112 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 ANXA2RQ3ZCQ2 193 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 Q86TA4 180 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 CYB561D1Q8N8Q1 229 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 CSTL1Q9H114 145 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 EDA2RQ9HAV5 297 aa5.99□□□□□ -1.45
CDC42SE2-208ENST00000505065 SMIM9A6NGZ8 99 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 C9JCJ5 164 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 F6UB75 175 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 DEFB1P60022 68 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 VAX2Q9UIW0 290 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 F6UZH7 168 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 PDE6DO43924 150 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 LEPP41159 167 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 ATP5G3P48201 142 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 ZNF138P52744 262 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 TMEM256Q8N2U0 113 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 C11orf72Q8NBR9 251 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 AAMDCQ9H7C9 122 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 SELENOKQ9Y6D0 94 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 WNK1Q9H4A3 2382 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 TAS2R60P59551 318 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 DEFA6Q01524 100 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 ZNF674Q2M3X9 581 aa5.98□□□□□ -1.45
CDC42SE2-208ENST00000505065 PGPA6NDG6 321 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 EIF3GO75821 320 aaKnown RBP eCLIP5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 MEF2BQ02080 365 aaPredicted RBP5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 SFT2D1Q8WV19 159 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 NOTCH3Q9UM47 2321 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 RAB19A4D1S5 217 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 CRIP1P50238 77 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 TRBV20OR9-2A0A075B6H5 130 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 C19orf71A6NCJ1 209 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 CDKN1BP46527 198 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 ZNF738Q8NE65 137 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 NDUFAF3Q9BU61 184 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 ZFP30Q9Y2G7 519 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 TENM3Q9P273 2699 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 NACAE9PAV3 2078 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 IGKV2-40A0A087WW87 121 aaPredicted RBP5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 HMGB3O15347 200 aaKnown RBP5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 IGKV2D-40P01614 121 aaPredicted RBP5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 ACTL10Q5JWF8 245 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 PIK3CD-AS1Q5SR53 167 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 TMEM183AQ8IXX5 376 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 MRAPQ8TCY5 172 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 RNASE8Q8TDE3 154 aaKnown RBP5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 SLC35B3Q9H1N7 401 aa5.97□□□□□ -1.45
CDC42SE2-208ENST00000505065 RBFOX3A6NFN3 312 aa5.96□□□□□ -1.45
CDC42SE2-208ENST00000505065 PAGE4O60829 102 aa5.96□□□□□ -1.45
CDC42SE2-208ENST00000505065 SRP19P09132 144 aaKnown RBP5.96□□□□□ -1.45
CDC42SE2-208ENST00000505065 RANP62826 216 aaKnown RBP5.96□□□□□ -1.45
CDC42SE2-208ENST00000505065 GFI1BQ5VTD9 330 aa5.96□□□□□ -1.45
CDC42SE2-208ENST00000505065 BLNKQ8WV28 456 aa5.96□□□□□ -1.45
CDC42SE2-208ENST00000505065 C1QTNF4Q9BXJ3 329 aa5.96□□□□□ -1.45
CDC42SE2-208ENST00000505065 SCRT2Q9NQ03 307 aa5.96□□□□□ -1.45
CDC42SE2-208ENST00000505065 H3BTX0 84 aa5.96□□□□□ -1.46
CDC42SE2-208ENST00000505065 STHQ8IWL8 128 aa5.96□□□□□ -1.46
CDC42SE2-208ENST00000505065 SPATA25Q9BR10 227 aa5.96□□□□□ -1.46
CDC42SE2-208ENST00000505065 SORL1Q92673 2214 aa5.96□□□□□ -1.46
CDC42SE2-208ENST00000505065 C9JQL5 133 aa5.96□□□□□ -1.46
CDC42SE2-208ENST00000505065 NXPH4O95158 308 aa5.96□□□□□ -1.46
CDC42SE2-208ENST00000505065 GNG5P63218 68 aa5.96□□□□□ -1.46
CDC42SE2-208ENST00000505065 ERCC8Q13216 396 aa5.96□□□□□ -1.46
CDC42SE2-208ENST00000505065 EBLN2Q6P2I7 272 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms