RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TRAV34A0A0B4J273 112 aa9.67□□□□□ -0.86
PDLIM7-212ENST00000504380 UBE2CO00762 179 aa9.67□□□□□ -0.86
PDLIM7-212ENST00000504380 TCRAP04437 139 aa9.67□□□□□ -0.86
PDLIM7-212ENST00000504380 C9orf47Q6ZRZ4 202 aa9.67□□□□□ -0.86
PDLIM7-212ENST00000504380 LINC00479Q96M42 142 aa9.67□□□□□ -0.86
PDLIM7-212ENST00000504380 OVOL2Q9BRP0 275 aa9.67□□□□□ -0.86
PDLIM7-212ENST00000504380 TEX46H3BTG2 121 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 CRXO43186 299 aaPredicted RBP9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 SPRY2O43597 315 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 NUTF2P61970 127 aaKnown RBP9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 IFITM2Q01629 132 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 TMEM78Q5T7P6 136 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 CCDC28AQ8IWP9 274 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 CSNK1G2-AS1Q8NCQ2 148 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 RNF183Q96D59 192 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 LINC00477Q96M19 166 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 SPATA25Q9BR10 227 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 DNAH9Q9NYC9 4486 aa9.66□□□□□ -0.86
PDLIM7-212ENST00000504380 IGHV3OR16-12A0A075B7B8 117 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 RBAKDNA6NC62 111 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 PEX7O00628 323 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 RBMY1A1P0DJD3 496 aaKnown RBP9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 RBMY1CP0DJD4 496 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 PPT1P50897 306 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 ZNF138P52744 262 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 RBMY1FQ15415 496 aaKnown RBP9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 Q6ZWC4 215 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 TVP23CQ96ET8 276 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 RCHY1Q96PM5 261 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 RARRES2Q99969 163 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 ZMAT4Q9H898 229 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 ZNF492Q9P255 531 aa9.65□□□□□ -0.86
PDLIM7-212ENST00000504380 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 C11orf94C9JXX5 98 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 PRM2P04554 102 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 NHLRC4P0CG21 123 aaPredicted RBP9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 LEPP41159 167 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 PRR9Q5T870 116 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 Q6ZQT7 251 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 C1orf158Q8N1D5 194 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 LYPD6BQ8NI32 183 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 FAM19A4Q96LR4 140 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 ATG101Q9BSB4 218 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 MANBALQ9NQG1 85 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 PSG8Q9UQ74 426 aa9.64□□□□□ -0.87
PDLIM7-212ENST00000504380 IGLV2-11P01706 119 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 RNASE4P34096 147 aaKnown RBP9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 CDKN1BP46527 198 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 BTN1A1Q13410 526 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 GFI1BQ5VTD9 330 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 PRNTQ86SH4 94 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 ZFAND2AQ8N6M9 145 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 CYB561D1Q8N8Q1 229 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 IGF2BP2-AS1Q96M15 143 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 C1QTNF4Q9BXJ3 329 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 NKX6-2Q9C056 277 aaPredicted RBP9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 ARL2-SNX15V9GYD0 113 aa9.63□□□□□ -0.87
PDLIM7-212ENST00000504380 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 LOC102723971A0A1B0GUV8 181 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 F6UZH7 168 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 INSP01308 110 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 IFNA1P01562 189 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 AMBPP02760 352 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 NMBP08949 121 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 BCL2P10415 239 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 TSPOP30536 169 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 C8orf49Q96NF6 230 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 ODF3Q96PU9 254 aa9.62□□□□□ -0.87
PDLIM7-212ENST00000504380 HUWE1Q7Z6Z7 4374 aaKnown RBP9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 SERTM2A0A1B0GWG4 89 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 RBFOX3A6NFN3 312 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 K7EQM0 130 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 DEFB4AO15263 64 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 GPX1P07203 203 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 CRISP2P16562 243 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 AKR1C3P42330 323 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 FLI1Q01543 452 aaPredicted RBP9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 PMS2P11Q13670 270 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 TMEM75Q8N9X5 138 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 HIST1H2BAQ96A08 127 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 VAX2Q9UIW0 290 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 U3KQK5 164 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 X6R8D5 127 aa9.61□□□□□ -0.87
PDLIM7-212ENST00000504380 C7orf71A4D174 169 aa9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 ZNF705GA8MUZ8 300 aaPredicted RBP9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 KLLNB2CW77 178 aa9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 MEF2BQ02080 365 aaPredicted RBP9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 TOR2AQ5JU69 321 aa9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 ZNF705AQ6ZN79 300 aaPredicted RBP9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 LINC01587Q99440 93 aa9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 TMEM208Q9BTX3 173 aa9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 TREM1Q9NP99 234 aa9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 GOLT1BQ9Y3E0 138 aa9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 TENM3Q9P273 2699 aa9.6□□□□□ -0.87
PDLIM7-212ENST00000504380 HTN1P15515 57 aa9.59□□□□□ -0.87
PDLIM7-212ENST00000504380 Q86TA4 180 aa9.59□□□□□ -0.87
PDLIM7-212ENST00000504380 C2CD4CQ8TF44 421 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 580.5 ms